Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g03082 | ATGGCTGATAATAATGATCATCAGCAGTCTCTCGTCACTGGCAGATTTGGTGTCTTACTATTTGCCATGGGTTCAGCCAGTTTTATGATCACAATGTACCATCTCTTAGTCCTTTGTTGCCAAAACGCAGCAGAAGAGGCACGACGTCGTCACAGGAATGTAGAACAAGTCACCACCACCGTAGATTTTGGGCCCTCACAAACGCCGTCCACCGGAGAGGGCGTTTCATTGTCACACCTGATTCCAGCTCACAAGTATGTGAAGAAGAAAAAGGAGAAGAATTGTGTGGGAGATTGTGATGGAGATGATGATGATGGGACTTGTGCTGTGTGCTTGGGAGAATTTGAAGAGGGTGAGGAGGCAAGGGCGTTGCCCTTGTGCATGCACTCTTTCCATGTTGCATGCATAGATATGTGGCTCCATTCCCATTCCACGTGTCCACTTTGCCGGGGTGATGCCACGCCATCGCCAGCGGTTCCACAGCATTCGCCGGAGATTGGTTCCGGCGAGGTGAATGCACATCATAGCATAGATATGATGCAAATAGCTCTTGTCCAAAATGGGTTGGTGCGACGGTGA | 579 | 0.494 | MADNNDHQQSLVTGRFGVLLFAMGSASFMITMYHLLVLCCQNAAEEARRRHRNVEQVTTTVDFGPSQTPSTGEGVSLSHLIPAHKYVKKKKEKNCVGDCDGDDDDGTCAVCLGEFEEGEEARALPLCMHSFHVACIDMWLHSHSTCPLCRGDATPSPAVPQHSPEIGSGEVNAHHSIDMMQIALVQNGLVRR* | 193 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g03082 | 192 | Pfam | Ring finger domain | 107 | 150 | IPR001841 | - | |
Rops2g03082 | 192 | CDD | RING-H2_EL5-like | 108 | 150 | - | - | |
Rops2g03082 | 192 | ProSiteProfiles | Zinc finger RING-type profile. | 108 | 150 | IPR001841 | - | |
Rops2g03082 | 192 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 80 | 157 | IPR013083 | - | |
Rops2g03082 | 192 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 7 | 153 | IPR044675 | - | |
Rops2g03082 | 192 | SUPERFAMILY | RING/U-box | 102 | 156 | - | - | |
Rops2g03082 | 192 | SMART | ring_2 | 108 | 149 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g03082 | Rops-Chr2 | 55569556 | 55570134 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g03082 | 19 | 175 | C3H Transcription Factor Family | AT5G17600 | 35.542 | 2.94e-21 | 87.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g03082 | - | - | lja:Lj0g3v0111029.1 | 202.216 |