Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03075 ATGTTTACATGCATAGCGTGTACGAAGCAAACTTCAGATGATAGGGACGATGAAGGACCCCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACCACGCAGATAAAGGATATGGCACTGAAATTTTCAGGTGCTTACAAGCAATGCAAACCCTGCACAGGGTCAAGTAGCTACAAGAAAGGACATAGACCATATCCAGACTTTGATACCATCTCAGAAGGGGTTCCATATCCTTATATTGGAGGCGCAAGCTCAAGTTCAACCCCTGCATGGGACTTCACTACCTCTAATTACCCTGGTGGAAGATCTGACCCAAGATTTACTGGGGCATTTGGTGATGACCGCACCCCTAGAGCCTCAGCATCAGTTTGTGATGTAGTGTTAGAGGAAGAGGATGAGCCTAAGGAGTGGATGGCACAAGTGGAGCCAGGGGTTCACATTACCTTTGTGTCTCTTCCTAATGGTGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATGTTCAATAAATGGCAAGCTCAAAAATGGTGGGGTGAGAATTACGACAGAATCATGGAACTTTATAACGTCCAGAGATTTAATCGACAAGCTCTTAACACTCCTCCAAGATCTGAGGATGAGCAAAGAGATTCTTCTTACTCAAGATTGACATCTGCAAGAGAAAGCCCCATGGCCTCAAACAATTGGACACCGAGGAGTCACTACAGACCCTCTGGGTTGGATCACGGTGGTGGCCACCAATTCCATGCAGGGTCATCTATGGAGCCACCAAGGGCAACCACCTCTTCTTCTAGGGATGAGCCTTCTCTTAGCAATGCCAGTGAAATGGAGGCAGAATGGGTAGAGCAAGATGAGTCTGGAGTTTACATTACAATCAGGCAATTAGCTGATGGGACCAGGGAACTTAGACGTGTCAGATTCAGCCGGGAAAGATTTGGGGAGGTAAATGCAAAAACTTGGTGGGAAGAGAACAGGGAGAGAATACAAGCTCAATATCTTTGA 1017 0.4671 MFTCIACTKQTSDDRDDEGPRESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSYKKGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTTSNYPGGRSDPRFTGAFGDDRTPRASASVCDVVLEEEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQKWWGENYDRIMELYNVQRFNRQALNTPPRSEDEQRDSSYSRLTSARESPMASNNWTPRSHYRPSGLDHGGGHQFHAGSSMEPPRATTSSSRDEPSLSNASEMEAEWVEQDESGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03075 338 MobiDBLite consensus disorder prediction 1 31 - -
Rops2g03075 338 MobiDBLite consensus disorder prediction 220 239 - -
Rops2g03075 338 MobiDBLite consensus disorder prediction 259 276 - -
Rops2g03075 338 ProSiteProfiles BRX domain profile. 283 338 IPR013591 -
Rops2g03075 338 MobiDBLite consensus disorder prediction 10 24 - -
Rops2g03075 338 MobiDBLite consensus disorder prediction 203 281 - -
Rops2g03075 338 Pfam Transcription factor regulating root and shoot growth via Pin3 282 337 IPR013591 -
Rops2g03075 338 Pfam Transcription factor regulating root and shoot growth via Pin3 139 193 IPR013591 -
Rops2g03075 338 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 338 IPR044532 -
Rops2g03075 338 ProSiteProfiles BRX domain profile. 139 194 IPR013591 -
Rops2g03075 338 Pfam Transcription factor BRX N-terminal domain 23 56 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03075 Rops-Chr2 55344686 55351158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03075 1 338 Major Intrinsic Protein MIP AT1G31880 67.898 1.16e-167 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03075 - - ccaj:109789470 613.994