Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03074 ATGGAAAGGTACAAGTTAATTAAGCAAGTTGGTGATGGAACATTTGGGGGTGTCTGGAGAGCCATTAATAAGCAAAGTGAAGTTGTGGCAATCAAGAAAATGAAGAAGAAGTATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGAAAAATGAATCACCCAAATATCGTGAAGTTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAATCTCTACCAACTTATGAAAAACAGGGTAAAGCTGTTTTCTGAAGATGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCCTATATGCACCAGCGTGGATACTTTCATCGGGATCTGAAGCCTGAAAACTTGCTGGTCACCAAGAATATCATCAAAATTGCTGATTTTGGCCTAGCCCGAGAGATCAGTTCACAACCACCCTATACTGAGTATGTCTCCACACGATGGTATCGAGCTCCTGAAGTCCTGCTACAGTCTTACCTGTATGGCTCTAAAGTTGACATGTGGGCAATGGGTGCTATTATGGCTGAGTTGTTCACTCTCCGTCCTCTATTTCCGGGTACCAGTGAAGCAGATGAGCTCTACAAAATATGCAGTGTGATGGGTAGTCCGACCACTGAATCCTGGGCAGATGGACTCAAACTTGCTAGGGATATCAACTATCAGTTTCCACAGCTTGCTAGTGTAGATCTCTCTGTACTGATCCCATCTAGAAGTGGTGATGCAATCAACCTTATTGCATCACTTTGTTCATGGGATCCCTGCAAGAGACCAACAGCAGCAGAGGCCCTTCAGCATCCTTTCTTCCAGAGTTGTTTTTACATCCCTCCGTCCCTTCGCACCAGAGCAGTAACCAGAACTCCTCCATCTGCTGGAACCAGGGGTGCACTGGATCGGCAAGGGGTCAAGAGATACCCGGGTGCTTTGCCTAATTCCAAACTCACCAATAATTTTTCTTCCCCGAAATTTTCTCCTTTAGCTTCAGGTGTGCAACGGAAGCTTGATATGGCAAATGAGGATGGAATTAAGAACAAGAAGTCATTGAAGACTACTCAACAACCAAAATATCAACCACCAGGAAAATACAGCCCAACTTCTGTAAACAAGGGGAGGACTACACGTGGGGTTTCAGAGACAGCTGAGAAGTTGGCCAATATGTCTATTGATACTCGAAGACAGTCCTTGGGGCAAACCCGTCATCCATTGAAGGCTGGAGTCAATTGGAATTCTGAATCTGGAAACTTCCTTCTCAAGCCCTCCCAACAGATTCCAACTGGAAGAACTTTCACAAGAAAAGTTGCTGGATGA 1347 0.4402 MERYKLIKQVGDGTFGGVWRAINKQSEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKNRVKLFSEDEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKNIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYGSKVDMWAMGAIMAELFTLRPLFPGTSEADELYKICSVMGSPTTESWADGLKLARDINYQFPQLASVDLSVLIPSRSGDAINLIASLCSWDPCKRPTAAEALQHPFFQSCFYIPPSLRTRAVTRTPPSAGTRGALDRQGVKRYPGALPNSKLTNNFSSPKFSPLASGVQRKLDMANEDGIKNKKSLKTTQQPKYQPPGKYSPTSVNKGRTTRGVSETAEKLANMSIDTRRQSLGQTRHPLKAGVNWNSESGNFLLKPSQQIPTGRTFTRKVAG* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03074 448 SUPERFAMILY Protein kinase-like (PK-like) 1 286 IPR011009 -
Rops2g03074 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Rops2g03074 448 FunFam serine/threonine-protein kinase MAK isoform X1 83 292 - -
Rops2g03074 448 MobiDBLite consensus disorder prediction 297 340 - -
Rops2g03074 448 MobiDBLite consensus disorder prediction 323 339 - -
Rops2g03074 448 Pfam Protein kinase domain 4 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03074 448 MobiDBLite consensus disorder prediction 352 390 - -
Rops2g03074 448 CDD STKc_MAK_like 4 282 - -
Rops2g03074 448 Gene3D Transferase(Phosphotransferase) domain 1 82 288 - -
Rops2g03074 448 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Rops2g03074 448 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 346 - -
Rops2g03074 448 ProSiteProfiles Protein kinase domain profile. 4 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03074 448 MobiDBLite consensus disorder prediction 360 390 - -
Rops2g03074 448 SMART serkin_6 4 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03074 448 FunFam serine/threonine-protein kinase MAK isoform X1 1 82 - -
Rops2g03074 448 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03074 Rops-Chr2 55322768 55327590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03074 1 289 Core Cell Cycle Gene Families AT3G48750 38.255 9.18e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Rops2g03074 Pkinase 9.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03074 K08829 - gmx:100784474 793.497