Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03072 ATGGCGAAAACAAGGTCCTCAGATCAGGTTGTTCACTTCATGGACCAACAACATAACCCTAAAGTTTCCTCTATGGACATTGAAAATAACCAAAGTGCAGAAGCTCATGAGAAACCCAAACACCCCTTAAGAGTCAAAACTCTTAACCGTCTCAGCTTCTCAAAACCCAAATCCAGAATCCTTGAATATAACTACCCACCTCGCAACAAAGTAGCTGCAACCTCTGAAGAAGAAAGTGACATTCAACCTTCCCACCACAAGATCATTTCCATAGATGAAGATGAAGATGATGATGAATGGGAAGAAGAAGAGATGGAAGAGGAGGATGGTGAAGAACATGGTCCAAAGTTACACCAAAAGAGGAAGTTTAAGGTGAAGTGGAGGCTCATTGTGGAATGGGTTTTGTTTCTTAATATATTAACTTGCTTGGTGTGTTCCCTCACAATAACTTCCATCACTAATATTCACTTGTTGGGTTTGGAGATTTGGAAATGGTGTTTGATGGTAATGGTCACTTTTAGTGGCCGTTTGGTTTCTGGGTGGTTAGTTGGTGTAACTGTTTTCATCATTGAGAGAAACTTCATGCTTAGAGAGAAAGTCTTGTACTTCATCTATGGACTAAGGAAGAGCATAAGAAACTGTTTGTGGTTAGGTCTTGTTTTGCTTTCTTATTGGAGTGTCGTCTTTGATGATGTTCAAAAGAAAAACCACAAGTTCCTCAACATGGTGTTTCAAGCACTTGTGGCTGTGTTAGTGGGTGCTATCATTTGGCTAGTTAAGATTGTGCTTGTGAAGATGTTAGCTTCTTCATTTCATGTGACCACTTACTTTGATAGAATGCAAGAGAGTGTTTTTCATCACTACATATTGGACACCTTGTCAGGTCCACCTATGGAAGAAGCTGAACAAATGTTGCAACATCACCACTTAATAGGATCTAAGTCCATGCCTTCGAGAATGAAGTTGAAGGATGCAAAGATTTTGTATAAGTCTAAGAAATTTGGGTCTAGGAGGATTGATATGGAGAAGCTGAGAGAGCTTAGCATGGAGAGCACTGCATCTGCATGGAGTGTGAAGAGGCTTATTAACTATGTTAGGTCTTCAGGTTTGTCTACAATTTCAAGGACCGTGGATGATTTTGGGAGTGCTGAGTCTGAGATCAATAGTGAGTGGGAAGCTAGAAATTGTGCTCAAAGGATATTCAAGAATGTTGCCAAACCTGGTGCCAAGTACATTGAAGAGGAGGATCTCATGAGATTTTTGAAGAGGGTTGAGATACATACCATATTCCCACTCTTTGAAGGTGCTCTTGAAACTGGGAAGATCAGCAGGTCTTCATTTAGAAATTGGGTGATTCGAGCTTATTATGAACGAAAGGCTCTAGCACAATCACTGAATGATACCAAAACAGCAGTGCAGCAGCTACACAAACTAGCAAGTGCGGTTGTAAGTGTGATAATAATCATCGTGGTCCTTTTGGTGATGGGGGTGGCTACGATCAAGATAGTATTATTCTGTATCACACAAACCGTTTTAATAGGGGTTGCCTTCCAAGGTACTTGCAAGACTGTCTTAGAGGCCATCATCTTTGTCTTTGTCATGCACCCTTTTGATATTGGAGACCGCTGTGTCATTGATGGTGTTCAGATGATTGTGGAAGAGATGAATATTTTGACAACAGTGTTTCTTCGATATGACAATGAGAAAATATACTACCCAAACGCAGTTTTGCTCACTAAGCCAATAAGCAATTTCTATAGGAGTCCAGAGATGTGGGATTCAATTGATTTCACCATTGATGTGTCAACTCCCATGGAGACTATCATTGCACTCAAGAAATCAATACAAACGTACATTGAGAGCAAGCCAAAGTATTGGAATCCAAAGCACAGTGTGATAGCCAAACAAATAGATAATGTGGACAAGTTGAAGCTGTGCTTAAGTGTGCAACACACCATCAACCATCAGAACTACGGTGAGAGAAGCATTAGGATAACGGAACTCCTCTTGGAATTGAAAAAGATATTTGAGATCCATGGTGTCAAGTACCATCTTCTTCCTCAGGAGATCCAGATTACCCAGATGAACATTGAGAATGGGAGAGTTCTGTTCCAATCATGA 2121 0.405 MAKTRSSDQVVHFMDQQHNPKVSSMDIENNQSAEAHEKPKHPLRVKTLNRLSFSKPKSRILEYNYPPRNKVAATSEEESDIQPSHHKIISIDEDEDDDEWEEEEMEEEDGEEHGPKLHQKRKFKVKWRLIVEWVLFLNILTCLVCSLTITSITNIHLLGLEIWKWCLMVMVTFSGRLVSGWLVGVTVFIIERNFMLREKVLYFIYGLRKSIRNCLWLGLVLLSYWSVVFDDVQKKNHKFLNMVFQALVAVLVGAIIWLVKIVLVKMLASSFHVTTYFDRMQESVFHHYILDTLSGPPMEEAEQMLQHHHLIGSKSMPSRMKLKDAKILYKSKKFGSRRIDMEKLRELSMESTASAWSVKRLINYVRSSGLSTISRTVDDFGSAESEINSEWEARNCAQRIFKNVAKPGAKYIEEEDLMRFLKRVEIHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKLASAVVSVIIIIVVLLVMGVATIKIVLFCITQTVLIGVAFQGTCKTVLEAIIFVFVMHPFDIGDRCVIDGVQMIVEEMNILTTVFLRYDNEKIYYPNAVLLTKPISNFYRSPEMWDSIDFTIDVSTPMETIIALKKSIQTYIESKPKYWNPKHSVIAKQIDNVDKLKLCLSVQHTINHQNYGERSIRITELLLELKKIFEIHGVKYHLLPQEIQITQMNIENGRVLFQS* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03072 706 Pfam Mechanosensitive ion channel 477 682 IPR006685 GO:0016020|GO:0055085
Rops2g03072 706 SUPERFAMILY Sm-like ribonucleoproteins 527 585 IPR010920 -
Rops2g03072 706 FunFam Predicted mechanosensitive ion channel 536 585 - -
Rops2g03072 706 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 20 696 IPR016688 -
Rops2g03072 706 MobiDBLite consensus disorder prediction 92 115 - -
Rops2g03072 706 MobiDBLite consensus disorder prediction 1 48 - -
Rops2g03072 706 Gene3D - 536 585 IPR023408 -
Rops2g03072 706 PIRSF Memb_At2g17000 2 705 IPR016688 -
Rops2g03072 706 MobiDBLite consensus disorder prediction 1 30 - -
Rops2g03072 706 MobiDBLite consensus disorder prediction 93 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03072 Rops-Chr2 55295166 55300888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03072 7 696 Mechanosensitive Ion Channel Family AT5G12080 42.483 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03072 K22048 - gmx:100813521 1141.33