Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03058 ATGAGCTCCTCACAACGCACACCAATATCATGCTCCAAGAGCTTCGATTTGGAATCCTCTCCTTTCAAAGGACACAAAACCTATGGACAAAGAATGATAATGGAAACAGCCAACTCTAGCTTTTTGCTTTCTTTTTCCTTTCTGAACCCTCATGCAATTGTCAAGCAGCTGAGAACTCTCCCTAACATGACAATCCTCAGTGTGTTACTCTTTCTGGGATTCTTGTGGGCTGAGATTCATGTCATCTCTTCATTTACTGATCCTCAAGATGTTACTGTACTTCGATCTTTAAAAGATATATGGCAAAATACACCACCCAGCTGGGACAAATCAGATGACCCCTGTGGAGCACCCTGGGAAGGAGTGACCTGCAACAAATCCAGGGTTACTTCATTGGGACTGTCAACCATGGGCCTGAAGGGTAAATTAAGTGGAGATATTGGTGGACTCACAGAATTGAGATCCTTGGACTTGTCATTTAATAAAGGTTTAACAGGTCCTCTCACTCCACAATTGGGAGAGCTAAGCAATCTAAATATTCTGATTTTGGCTGGTTGCAGCTTCAGTGGCAATATTCCAGATGCATTGGGAAATCTTGCAGAGCTATCTTTCCTGGCTTTAAATTCAAACAACTTCACTGGAAAAATACCTGCTTCATTGGGTAAACTCTCCAAAATTTATTGGTTGGACTTGGCAGACAATCAGCTCACAGGGCCTTTCCCAGTTTCAACCTCCACCTCTCCTGGATTAGACCTCCTTTTAAAGGCTAAGCACTTCCATTTCAACAAGAACCAGCTTTCAGGTTCCATTCCCCCCAAACTTTTCAGCTCTGACATGGTACTCATACACATATTGTTTGATGGAAATAATTTAAGCGGGAGTATACCTTCCACAATAGGACTAGTCCAGACAGTTGAGGTTCTTCGGCTTGATAGAAATTCCCTTACAGGAGAGGTCCCTTCAAATCTCAATAACCTTACAAACATCAATGAATTGAATTTAGCACACAATCATTTGATAGGTCCTTTGCCAGACTTAACTGAAATGGATACCCTCAACTATGTGGATCTTAGTAACAACTCTTTTGATCCATCTGAAGCTCCAACTTGGTTCTCAACTCTACCATCACTCACCACTCTTATTATGGAGTTTGGATCTCTTGAGGGTCCTCTTCCTTCGAAACTCTTTAGCATTCCTCAAATACAGCAAGTGAAACTTCGAAGCAATGCATTGAACAATACATTGAACATGGGTGACAACATTTGTCCCCAATTGCAGCTTGTAGATTTGCAAGACAACCAGATATCCTCACTAACGCTCGATTCACAATACAAAAATACATTGATTCTAATAGGAAATCCAGTGTGCAGTACTGCTCTCTCAAATACAAATTACTGCCAACTCCAACAACAGTCTAAACAACCCTATTCTACCAGCTTGGCTAATTGTGGAGGCAAATCTTGTCCCCCTGATCAAAAGCTCAGCCCACAAAGTTGTGAATGTGCCTATCCATATGATGGAATGATGTACTTTAGAGGACCCTTGTTCAGAGAACTTTCTAATGTAACTACTTTCCATTCACTTGAAATGAGCCTTTGGGTGAAATTGGGTTTAACTCCTGGCTCAGTTTCTTTACAAAACCCCTTCTTCAATAGTGATGATTATCTCCAAGTGCAACTAGCACTCTTTCCACCAACAGGGCAATACTTTAATAGGTCAGAAGTTCAAAGAATTGGGTTTGAATTGAGTAATCAAACTTACAAGCCTCCACACGAGTTTGGACCCTATTACTTTATTGCATTTCCTTATGCTTTCCCAGATTCCCACAGAGGATCTTCTCTTAGTAGAGGTGTTGTTATTGGGATAGCAGTTGGCTGCACAGTTTTGATTCTGAGCCTCATAGGGCTAGGGATATATGCAATTCTGCAAAAGAAGCGTGCAGAGAAAGCCATTGGATTAAGTAGACCATTTGCTGCCTGGGCACCAAGTGGCAAGGATAGTGGAGGTGCACCACAGTTAAAGGGAGCAAGATGGTTCTCTTATGATGAGCTCAAAAAGTACACCAATAATTTCTCTGGAAGCAATGAGATAGGCTTTGGTGGCTATGGCAAGGTGTACAAAGGGATTCTCCCTGATGGAAAAGTGGTTGCAATCAAACGAGCTCAGCAAGGATCAACGCAAGGAGGCCTAGAGTTCAAGACTGAAATCGAGTTGCTTTCAAGAGTTCACCACAAGAATCTTGTTGGCCTCGTAGGATTTTGCTTTGAACAAGGAGAACAAATGTTGGTTTATGAATTTATGCCCAATGGAACACTAAGGGAGAGTTTGTCAGGGAGATCTGACATTCATCTTGACTGGAAGAGGAGACTCCGCCTTGCTCTTGGTTCAGCCAGAGGACTTGCATACTTACATGAACTTGCCAACCCTCCCATAATCCACAGAGATGTGAAGTCCTCTAATATCTTGCTGGATGAAAATTTGACAGCAAAGGTTGCAGATTTTGGCTTGTCTAAGCTAGTATCAGACAGTGAGAAAGGCCATGTTTCAACTCAAGTTAAAGGGACACTGGGTTATCTGGATCCTGAATATTACATGACCCAACAACTAACTGAGAAGAGTGATGTGTACAGTTATGGGGTAGTTATGCTTGAACTAATAACATCCAAACAACCAATTGAGAAGGGTAAGTACATTGTTCGCGAGGTGCGCACCTTGATGAACAACAAGGATGAAGAGTATTATGGTATAAGGGAACTCATGGATCCAGTGGTTAGAAACACACCAAACCTTATAGGATTTGGCAAGTTCTTAGAGTTGACAATGCAATGTGTTGAGGAATCAGCTGCAGACCGTCCAACAATGAGTGAAGTTGTGAAAGCACTTGAAACCATTTTACAGAATGATGGGATGAATACAAATTCTACTTCTGCATCCTCATCTGCCACTGACTTTGGAGTTTCTAAAGGTGCCATGAGACATCCTTATATTGATACTACTTTTACTAAGAAGGACAATGTTAATGATAGTAATGCCTTTGACTACAGTGGGGGGTACACACTTTCAACCAAAGTTGAACCCAAATAG 3084 0.4167 MSSSQRTPISCSKSFDLESSPFKGHKTYGQRMIMETANSSFLLSFSFLNPHAIVKQLRTLPNMTILSVLLFLGFLWAEIHVISSFTDPQDVTVLRSLKDIWQNTPPSWDKSDDPCGAPWEGVTCNKSRVTSLGLSTMGLKGKLSGDIGGLTELRSLDLSFNKGLTGPLTPQLGELSNLNILILAGCSFSGNIPDALGNLAELSFLALNSNNFTGKIPASLGKLSKIYWLDLADNQLTGPFPVSTSTSPGLDLLLKAKHFHFNKNQLSGSIPPKLFSSDMVLIHILFDGNNLSGSIPSTIGLVQTVEVLRLDRNSLTGEVPSNLNNLTNINELNLAHNHLIGPLPDLTEMDTLNYVDLSNNSFDPSEAPTWFSTLPSLTTLIMEFGSLEGPLPSKLFSIPQIQQVKLRSNALNNTLNMGDNICPQLQLVDLQDNQISSLTLDSQYKNTLILIGNPVCSTALSNTNYCQLQQQSKQPYSTSLANCGGKSCPPDQKLSPQSCECAYPYDGMMYFRGPLFRELSNVTTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQVQLALFPPTGQYFNRSEVQRIGFELSNQTYKPPHEFGPYYFIAFPYAFPDSHRGSSLSRGVVIGIAVGCTVLILSLIGLGIYAILQKKRAEKAIGLSRPFAAWAPSGKDSGGAPQLKGARWFSYDELKKYTNNFSGSNEIGFGGYGKVYKGILPDGKVVAIKRAQQGSTQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMPNGTLRESLSGRSDIHLDWKRRLRLALGSARGLAYLHELANPPIIHRDVKSSNILLDENLTAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSYGVVMLELITSKQPIEKGKYIVREVRTLMNNKDEEYYGIRELMDPVVRNTPNLIGFGKFLELTMQCVEESAADRPTMSEVVKALETILQNDGMNTNSTSASSSATDFGVSKGAMRHPYIDTTFTKKDNVNDSNAFDYSGGYTLSTKVEPK* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03058 1027 SUPERFAMILY Protein kinase-like (PK-like) 676 976 IPR011009 -
Rops2g03058 1027 ProSiteProfiles Protein kinase domain profile. 691 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03058 1027 Gene3D Transferase(Phosphotransferase) domain 1 767 987 - -
Rops2g03058 1027 SUPERFAMILY L domain-like 86 362 - -
Rops2g03058 1027 Gene3D Ribonuclease Inhibitor 346 492 IPR032675 -
Rops2g03058 1027 SUPERFAMILY L domain-like 349 457 - -
Rops2g03058 1027 Pfam Leucine rich repeat N-terminal domain 88 125 IPR013210 -
Rops2g03058 1027 FunFam Leucine-rich repeat protein kinase family protein 660 766 - -
Rops2g03058 1027 FunFam Leucine-rich repeat family protein 89 245 - -
Rops2g03058 1027 Gene3D Ribonuclease Inhibitor 91 245 IPR032675 -
Rops2g03058 1027 CDD STKc_IRAK 697 964 - -
Rops2g03058 1027 Gene3D Ribonuclease Inhibitor 246 345 IPR032675 -
Rops2g03058 1027 FunFam Predicted protein 248 469 - -
Rops2g03058 1027 ProSitePatterns Protein kinases ATP-binding region signature. 697 719 IPR017441 GO:0005524
Rops2g03058 1027 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 767 978 - -
Rops2g03058 1027 Gene3D Phosphorylase Kinase; domain 1 665 766 - -
Rops2g03058 1027 Pfam Protein tyrosine and serine/threonine kinase 695 961 IPR001245 GO:0004672|GO:0006468
Rops2g03058 1027 PANTHER RECEPTOR-LIKE PROTEIN 55 95 964 - -
Rops2g03058 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Rops2g03058 1027 SMART serkin_6 691 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03058 Rops-Chr2 54912515 54922158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03058 63 1027 Receptor kinase-like Gene Family AT1G79620 71.615 0.0 1461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops2g03058 PK_Tyr_Ser-Thr 4.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03058 - - gmx:100792249 1749.56