Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03052 ATGGGTAGCAGGGACATGGAAAAAACCCCAAAAGAGAATGAGTCTAAGACACCTCCAGCTACGTCACAGGAACATTCTTCAACAACTGGCACTGGAACAGTTAATCCTGACTGGTCTAACTTTCAGGCATATTCTCCTATGCCTCCACATGGGTACTTGGCATCAAGTCCTCAAGCCCACCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGCACCCCGCCACATCCCTATGTTGCAATGTATCCCCATGGCGGCATATATGCTCATCCATCCATTCCTCCGGGATCTTATCCTTATAGTCCTTTTGCCATGCCTTCTCCAAATGGTATTGCGGATGCTTCGGGAAATACTCCAGGCAGCGTTGAAGCTAATGTTAAGCCTCCTGAGGTGAAGGAAAAATTACCCATCAAAAGATCAAAAGAAAGTTTGGGTAGTTTGAATATGATTACAGGAAAAAATAATGAACATGGTAAAGCATCAGGGACAACTGCTAATGGAATTCATTCCAAAAGTGGTGAGAGTGCAAGTGAAGGTACTAGTGAAGGAAGTGATGAAAATTCCCAGAATGACTCTCAATTGAAATCCGGGGAGAGGCAGGATTCTTTTGAAGATGAACCATCTCAAAATGGAAGTTCATTGCATGCTACTCAAAATGGGGTGCTTACTACACCTCATACAGTTAACCAATGTATGTCTATGGTACCTATCTCTGCTGCTGGTGCTCTCACTGCAGTTCCTGGTCCCCCAACTAATTTAAATATAGGAATGGATTATTGGGGTGCACCAACTTCATCTGCCGTTCCTGCACTGCATGGAAAGGTTCCTTCTGCTGCCGTTGCTGGAGGGATGGCTAATGCTGGGTCACGTGATAGCGTTCATTCACAACTTTGGCTACAGGATGAAAGAGAACTTAAAAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGCAGATCCAGGTTGCGAAAGCAGGTTGAATGCGATGAACTAGCTCAGCGTTCTGAGGCTTTGAAAGAAGAAAATGCCTCTCTCCGATCAGAAGTGAGCCGGATCAGGAGTGAGTACGAGCAGCTACTCTCTGAGAATGCAGCCCTCAAGGAGAGACTTGGGGAGGTACCTGGGAACAAGGATCTAAGGTCGGGCCAGAATGATCAGCATGTGGGTAATGATACTCAACAGGGTGATCAGACAGGCTGA 1209 0.4624 MGSRDMEKTPKENESKTPPATSQEHSSTTGTGTVNPDWSNFQAYSPMPPHGYLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSIPPGSYPYSPFAMPSPNGIADASGNTPGSVEANVKPPEVKEKLPIKRSKESLGSLNMITGKNNEHGKASGTTANGIHSKSGESASEGTSEGSDENSQNDSQLKSGERQDSFEDEPSQNGSSLHATQNGVLTTPHTVNQCMSMVPISAAGALTAVPGPPTNLNIGMDYWGAPTSSAVPALHGKVPSAAVAGGMANAGSRDSVHSQLWLQDERELKRQRRKQSNRESARRSRLRKQVECDELAQRSEALKEENASLRSEVSRIRSEYEQLLSENAALKERLGEVPGNKDLRSGQNDQHVGNDTQQGDQTG* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03052 402 MobiDBLite consensus disorder prediction 1 42 - -
Rops2g03052 402 Pfam bZIP transcription factor 304 366 IPR004827 GO:0003700|GO:0006355
Rops2g03052 402 MobiDBLite consensus disorder prediction 382 402 - -
Rops2g03052 402 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 311 326 IPR004827 GO:0003700|GO:0006355
Rops2g03052 402 MobiDBLite consensus disorder prediction 15 42 - -
Rops2g03052 402 SMART brlzneu 304 368 IPR004827 GO:0003700|GO:0006355
Rops2g03052 402 MobiDBLite consensus disorder prediction 370 402 - -
Rops2g03052 402 Gene3D - 307 376 - -
Rops2g03052 402 Coils Coil 324 372 - -
Rops2g03052 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 306 369 IPR004827 GO:0003700|GO:0006355
Rops2g03052 402 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 393 IPR044827 GO:0003700|GO:0006355|GO:0043565
Rops2g03052 402 MobiDBLite consensus disorder prediction 146 198 - -
Rops2g03052 402 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Rops2g03052 402 SUPERFAMILY Leucine zipper domain 307 363 IPR046347 GO:0003700|GO:0006355
Rops2g03052 402 Pfam Disordered region downstream of MFMR 135 271 - -
Rops2g03052 402 MobiDBLite consensus disorder prediction 115 220 - -
Rops2g03052 402 CDD bZIP_plant_GBF1 309 359 IPR045314 GO:0003700|GO:0006355
Rops2g03052 402 MobiDBLite consensus disorder prediction 306 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03052 Rops-Chr2 54843311 54863558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03052 1 377 bZIP Transcription Factor Family AT2G35530 65.285 2.54e-166 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops2g03052 MFMR_assoc 4e-56 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03052 K09060 - gmx:100101912 648.277