Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03034 ATGGGTGCAAAGCCAAGAGCACACGACTCTCTACTCTTCTCCCTCTCTCGTTGGTGCTGCCTTCACTTTGTGATTCTCGCACAGAAGCATATATATTTAGCAAGTATGACATTCACACTCTACGACCTTAGCTCTGACTTTGGGTTGAAGAAGCTTGATGAGTACCTTCCCCCACGCAGTTATATCACTGGGTACCAAGCTTCAAAGGATGATGTCACTGTTTATGCAGCTTTGAAAACTGTTCCATCTGATGCATATGTGAATGTGTCCATGTGGTACAAGCATATTGATGCTTTGTTGAGAATGTCTAGTGTCACCGTGGAGGGATCTTCTCTGGTGTCAGATGAGACTGTTGCCACTCCCCCAGCTGCTGACATGAAGGCTACTGCAGTTGAGAACGATGATGATGTTGACACCCATAAACCTAGTTCACGTTCTCCTTCTCATTTCAAAGGATGGGGTGATAAGGCTCCTAAGCCTCGACCACAAAGGGAACATAGGAAGTCATCATCATTGCAGGACACCAACTTTTTCAGTCTGAAGTCCTTTAAAGAAATAGGCTGCACTCAAAATGTCATCCAATCCCTGCAGAAGCAGTCTTTCAAGCGCCCTTCACATGTCCAGGCTATAGCATTTGCTCCTGTTCTTGGTGGAAAGACTTGTGTCATAGCTAATCAAAGCAGTTCTGGAAAGACATTAGCCTATCTTGCACCAATAATTTAG 723 0.4481 MGAKPRAHDSLLFSLSRWCCLHFVILAQKHIYLASMTFTLYDLSSDFGLKKLDEYLPPRSYITGYQASKDDVTVYAALKTVPSDAYVNVSMWYKHIDALLRMSSVTVEGSSLVSDETVATPPAADMKATAVENDDDVDTHKPSSRSPSHFKGWGDKAPKPRPQREHRKSSSLQDTNFFSLKSFKEIGCTQNVIQSLQKQSFKRPSHVQAIAFAPVLGGKTCVIANQSSSGKTLAYLAPII* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03034 240 MobiDBLite consensus disorder prediction 152 171 - -
Rops2g03034 240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 240 IPR027417 -
Rops2g03034 240 MobiDBLite consensus disorder prediction 130 145 - -
Rops2g03034 240 MobiDBLite consensus disorder prediction 130 172 - -
Rops2g03034 240 FunFam Elongation factor 1-delta 1 38 113 - -
Rops2g03034 240 SUPERFAMILY GST C-terminal domain-like 43 104 IPR036282 -
Rops2g03034 240 Gene3D - 128 240 IPR027417 -
Rops2g03034 240 Gene3D - 31 112 - -
Rops2g03034 240 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 127 240 - -
Rops2g03034 240 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 181 209 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03034 Rops-Chr2 54158866 54159588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03034 42 130 Eukaryotic Initiation Factors Gene Family AT2G18110 61.458 1.01e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03034 K03232 - gmx:100777627 148.673