Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03033 ATGTCAAAATATGGGGTTCTATTCAAATCTATGGTTGTCACGGGTGGCTTTCGCCGAAGAACTCAGTTGGAAAATTTACGGCAGGGTGTCGGTATCTTAATAGCCACACCAGGTCGTTTTCTATTCCTGATAAATGAAGGATGCTTGCAGTTTACAAACCTAAGATATGTTGTGTTGGATGAGATAGATATACTCTTTAACGATGAGGACTGCGAAGTGGCTCTTCAGTGCTTGATTAATTCTTCACCAGTTGACGCACAATATTTATTTGTGACTGCAACTTTACCCAAAAATGTCTACATCAAGCTGGTTGAAGTTTTTCCCGACTGTGAAATGATCATGGGGCCTAGTATGCATAGAATAAGCTCTTGCCTTGAAGAAAGTCTAGTAGATCGCAGTGGAGAACATGGACATGAAAAACTCCAGATACTGCATTTTTGA 441 0.4036 MSKYGVLFKSMVVTGGFRRRTQLENLRQGVGILIATPGRFLFLINEGCLQFTNLRYVVLDEIDILFNDEDCEVALQCLINSSPVDAQYLFVTATLPKNVYIKLVEVFPDCEMIMGPSMHRISSCLEESLVDRSGEHGHEKLQILHF* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03033 146 Pfam DEAD/DEAH box helicase 9 99 IPR011545 GO:0003676|GO:0005524
Rops2g03033 146 Gene3D - 2 114 IPR027417 -
Rops2g03033 146 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 2 143 - -
Rops2g03033 146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 110 IPR027417 -
Rops2g03033 146 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 113 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03033 Rops-Chr2 54158310 54158750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03033 32 122 Eukaryotic Initiation Factors Gene Family AT5G11200 31.868 1.29e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03033 K13179 - gmx:100784377 221.476