Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03027 ATGAGGGGTGGTAGGAAAAGGAAGCTGCATTTAAGCAAGATATACTCATTCACATGCTTTAAGGCATCTTTCAAGGGAGATCATTCACAAATTGGAAGTAAAGGTTATTCAAGGGTGGTCTTCTGCAATGAGCCAGATAGTTCTGAGAATGGGATTAGGAATTATGCAGATAATTCTGTCAGATCTACAAAATATACAGCTGCTACTTTCCTTCCCAAATCACTGTTTGAGCAGTTTAGGAGAGTGGCAAACTTCTATTTCTTGGTCGCTGGCATCTTGGCCTTCACAAAACTTGCTCCATATAAAGCTGTCAGTGCTATCCTTCCTTTGATTGTTGTTATTGGAGCAACTATTGTGAAAGAAGGTATTGAAGACTGGCGTCGGAAAAAGCAGGATATTGAAGTGAACAATAGAAGAGTTAAAGCGCATAAAGGTGATGGCATTTTTGAATATACTGCATGGAAGAATCTGAGGGTGGGGGATATAGTGAAGGTAGAGAAGGATGAGTTCTTCCCAGCAGACCTGCTATTGCTTTCATCAAGTTATGAGGATGCAGTCTGCTATGTTGAGACTATGAACTTGGATGGGGAGACAAATTTGAAGTTAAAACAAGGGTTAGAGGTAACTTCATCCTTACATGAGGATCTCAACTTCCAAAATTTTAAAGCTACAGTTAAATGTGAAGACCCAAATGCAAATTTGTACTCATTTGTTGGGAGCTTGGAGTTTGAAGAGCAAAAGTATGCTCTTTCTCCTCAACAACTTCTTCTACGAGACTCTAAACTTCGTAATACAGACTATATTTTTGGAGCTGTCATCTTCACTGGTCATGACACTAAGGTTATTCAAAATTCTACTGATCCACCTTCAAAAAGAAGCAGAATTGAGAAGAAGACGGATAGAATCATCTACTTCTTGTTTTGTATTTTATTTCTAATGGCATTTGTTGGATCTATTTTCTTTGGCTTTACAACTGAAGATGACTTTCAAAATGGGTTGATGAAAAGATGGTATTTAAGACCAGATGATTCTACAATTTTCTTTGATCCAAATAGATTGGCTGCTGCAGCTATATATCATTGTTTGACAGCCTTAATGTTATATGGCTTCTTTATTCCCATCTCTTTGTATGTGTCAATAGAAATTGTCAAAGTCCTTCAGAGCATATTCATCAATCAAGATATCCATATGTACTACAAGGAAGCAGACAAACCAGCCCATGCTCGTACTTCAAACTTGAATGAGGAGCTTGGCCAAGTTGACACAATACTTTCTGATAAAACCGGAACTCTGACCTGCAACTCAATGGAGTTTATCAAGTGTTCTATTGCTGGGGTAGCTTACGGCCGTGGTGTTACAGAGGTTGAGAAGACCATGGCTAGAAGAAAAGGTTTACCAATAATTCATGAGCATGATCTGTCAGAAGCAGATGACATCAGGGGTTCTCTTGATAAAAATGAACTCATTAAAGGTTTCAACTTTATTGATGAAAGAATAATGAATGGAAATTGGGTCAATGAGCCTCATGCTAATGTTATCCAGAAGTTTTTTCGCCTATTGGCAGTATGTCATACAGCCATACCAGAAGTGGATAAAGAAACAGGAAATGTCTCATATGAGGCTGAATCCCCAGATGAAGCAGCATTTGTGATTGCAGCAAGAGAACTTGGTTTTGAATTCTACAGAAGGGCTCAGACTAATTTATCGACATATGAGTTGGATCCAATTTCTGGCAAGAAAGTTGAAAGGATGTACAAGCTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCGGTGATAGTGGAAGATGAAGAAGGAAAAATTTTGCTACTCTGCAAAGGTGCTGATAGTGTCATGTTTGAAAGGCTAGCCAAGAATGGGAGGGAGTTTGAAGAGAAAACCATGGAGCATGTGCATGAGTATGCTGATGCAGGTCTTAGAACCCTTATACTGGCTTATCGAGAACTTGATGCAGAAGAATACAAGGAGTTTGATAATAAATTCTCTAAGGCCAAGAATTCAGTTAGTGCAGATCAGGAAACACTGATCGAGGAAGTATCTGATAGTATCGAGAAGAATCTTATCCTTCTAGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGCATCGACAAGCTTGCCCAAGCAGGAATAAAAATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCAATCAATATTGGTTTCGCTTGTAGTTTGCTTAGACAAGGAATGAAACAGATTATAATTCATTTGGATAGTCCAGAAATTCAAACACTGGAGAAGGAAGGGGACAAGACAGCTATTGCCAACGCATCTAGGCAAAGTGTCCTCCTTCAGATATCTGAAGGTGCTGCACAGCTTGCAGCATACAGAGGGAGCTCTCAGCAGGCATTTGCTCTGATTATTGATGGCAAATCACTTGCTTATGCACTAGAGGATGATGTGAAGAACATGTTTCTGGAGCTCGCAATTCGTTGTGCATCTGTTATCTGCTGTCGCTCATCGCCAAAGCAGAAGGCACTGGTCACTAGATTGGTCAAATCTGGAACTGCAAAAACAACATTAGCTATTGGTGATGGAGCTAATGATGTAGGAATGCTTCAAGAAGCAGATATAGGTGTTGGTATAAGTGGTGTTGAAGGAATGCAGGCTGTTATGTCTAGTGATATTGCAATTGCACAATTCCGATATTTGGAACGATTACTTCTGGTGCATGGACATTGGTGTTACCGGAGGATCTCGAATATGATATGCTATTTTTTCTACAAGAATATCACATTTGGTTTCACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGAGAACCTGCATACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCATCACTTCCCGTGATTGCTCTTGGGGTATTTGACCAGGATGTATCTGCCCGGTACTGCCTGAAGTTTCCTTTGTTATATCAAGAAGGAGTACAAAATGTCCTTTTCAGCTGGCGTCGAATACTCAGCTGGATGCTTAATGGATTTTTCAGTGCCTTAATAATTTTCTTCTTCTGCACAAAATCAATGGAGCTCCAGGCCTTTGATGAAGAGGGTAGAACTGCAGGGAGGGATATACTTGGAGCAACCATGTATACTTGTGTAGTTTGGGTTGTAAACTTGCACATGGCACTAGCTATAAGTTACTTCACCATGATCCAACATTTTTTCATCTGGGGTTCCATTCTTTTCTGGTACATTTTTCTCCTGGTATATGGAGCAATGCCTCCAAGCTTCTCTGAAAATGCTTACAAAATCTTCATTGAAACTCTTGCTCCTTCCCCTTCCTATTGGATTGTGACATTTTTTGTGGTGATCTCAACCCTTATACCATACTTCTCATACTCAGCAATTCAGATGAGGTTCTTTCCCATGTATCATGAAATGATACAATGGATAAGGTACGAGGGGAAGACTATGGATCCTGAGTACCATGATATGGTGCAGCAGAGATCATTGCAGCCAACCAATGTCGGTTCGACAGCACGCATAGCTGCCAAGGCAAACCAATCAATGGACAGAACTATTAACCTTAGATAA 3597 0.3995 MRGGRKRKLHLSKIYSFTCFKASFKGDHSQIGSKGYSRVVFCNEPDSSENGIRNYADNSVRSTKYTAATFLPKSLFEQFRRVANFYFLVAGILAFTKLAPYKAVSAILPLIVVIGATIVKEGIEDWRRKKQDIEVNNRRVKAHKGDGIFEYTAWKNLRVGDIVKVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSSLHEDLNFQNFKATVKCEDPNANLYSFVGSLEFEEQKYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKTDRIIYFLFCILFLMAFVGSIFFGFTTEDDFQNGLMKRWYLRPDDSTIFFDPNRLAAAAIYHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYKEADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKTMARRKGLPIIHEHDLSEADDIRGSLDKNELIKGFNFIDERIMNGNWVNEPHANVIQKFFRLLAVCHTAIPEVDKETGNVSYEAESPDEAAFVIAARELGFEFYRRAQTNLSTYELDPISGKKVERMYKLLNVLEFNSSRKRMSVIVEDEEGKILLLCKGADSVMFERLAKNGREFEEKTMEHVHEYADAGLRTLILAYRELDAEEYKEFDNKFSKAKNSVSADQETLIEEVSDSIEKNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLDSPEIQTLEKEGDKTAIANASRQSVLLQISEGAAQLAAYRGSSQQAFALIIDGKSLAYALEDDVKNMFLELAIRCASVICCRSSPKQKALVTRLVKSGTAKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISNMICYFFYKNITFGFTLFLYEVYASFSGEPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILSWMLNGFFSALIIFFFCTKSMELQAFDEEGRTAGRDILGATMYTCVVWVVNLHMALAISYFTMIQHFFIWGSILFWYIFLLVYGAMPPSFSENAYKIFIETLAPSPSYWIVTFFVVISTLIPYFSYSAIQMRFFPMYHEMIQWIRYEGKTMDPEYHDMVQQRSLQPTNVGSTARIAAKANQSMDRTINLR* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03027 1198 CDD P-type_ATPase_APLT_Dnf-like 57 1025 - -
Rops2g03027 1198 SFLD C1.7: P-type atpase like 406 916 - -
Rops2g03027 1198 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Rops2g03027 1198 PRINTS P-type cation-transporting ATPase superfamily signature 865 884 - -
Rops2g03027 1198 Gene3D - 117 286 - -
Rops2g03027 1198 SUPERFAMILY HAD-like 419 920 IPR036412 -
Rops2g03027 1198 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Rops2g03027 1198 FunFam Phospholipid-transporting ATPase 116 286 - -
Rops2g03027 1198 Gene3D - 546 700 IPR023299 GO:0000166
Rops2g03027 1198 Pfam Phospholipid-translocating P-type ATPase C-terminal 893 1143 IPR032630 -
Rops2g03027 1198 Gene3D - 701 905 IPR023214 -
Rops2g03027 1198 Coils Coil 123 143 - -
Rops2g03027 1198 NCBIfam phospholipid-translocating P-type ATPase 55 1150 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Rops2g03027 1198 NCBIfam HAD-IC family P-type ATPase 836 947 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops2g03027 1198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1156 - -
Rops2g03027 1198 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1143 IPR023298 -
Rops2g03027 1198 SFLD p-type atpase 406 916 IPR044492 -
Rops2g03027 1198 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 702 IPR023299 GO:0000166
Rops2g03027 1198 FunFam Phospholipid-transporting ATPase 542 700 - -
Rops2g03027 1198 Pfam Phospholipid-translocating ATPase N-terminal 40 106 IPR032631 -
Rops2g03027 1198 FunFam Phospholipid-transporting ATPase 700 905 - -
Rops2g03027 1198 Pfam Cation transport ATPase (P-type) 532 626 - -
Rops2g03027 1198 SUPERFAMILY Calcium ATPase, transduction domain A 145 283 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03027 Rops-Chr2 53984370 53992794 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03027 3 1186 Primary Pumps ATPases AT1G68710 74.979 0.0 1912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03027 K01530 - gmx:100781421 2115.5