Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03025 ATGACTAATGGTCGACCACAGGGAGTTGTTTTTACAGACCCACGTGCTTTTTTGAATAGTAGCATGGCTAATGAAATTGCTTTACTAGAGGCACTCACAGTGGTTACAGACAAGGATGGAGGGCAACATATGTCAAGAGGGAAGAGTCCAAAAGGAGCAAGTGGCATGAGGAATGAAACTGATTTGGTTGTGGTCCCTCATGTAGGAAGAGACGTAGATGCTATTATTGGGCCCACAATGAATAAAACTTCATTTAATAGTATTGGTGGGCCTGATGCATCACAAGGCTATTATGTAGCCAATTTTGGGTCGAATGAAGACACGGTAAGTGGTCCTCTGTCTAAGAAGTTTAACTCCAATCCACAAAAAGAAACCAATCGTGGAGTAGAAGGGGAATCTCCTTTGCGTGGTGGGATGTTCATTCCTCTGTTGGAAAATCTGCCAGCTTCACCAATGTCCTTATCTCGTAGGCGGTGCAAACCAAAGGAGAACCTTGTGAATCAGTCAGCTCCTTCAAAAAAAGTACTGAAGAAAATGGTGTTGGGAGCGGAAAGAGTGATAAAAAACAGAAAGAGATCTGAGAAGCATCTGTTAAGGCTAATCCATCCGTTCGCCTCTCGGAAAACGCTCGGGCTGAAGCGCAGAAGCCTTCTTTGCCAAGAAAATGAAACGTGCTTGGAAGATGAGGTTAGTGATGAAGAATACTCATTCATTCAATCACAGCAAGATTGTGGGGTTTCAGAGGATGAGCATGTGGGTGTTTTGATTGAGAGAGAGATCGGTTTTGGGTTCAAAAAGTGTGGAACTTTGGTGTTTGGAGACTGGATTAAACGTACCCGAATGGATGCAATCAATTGGATTCTCAAAACAAGAGCAACATTTGGTTTTCGCTTTCAAACGGCTTATTTGTCTGTCACATACTTCGATCGATTCCTTTCTAGGCGCTCCATTGACGTGAGTTCAATTGCTATTCTTCCAATGTCAACATTGAGTGAAAAGTATTGGGCAATTCGGTTATTATCAATTGCATGCCTTTCTTTGGCTGCAAAGATGGAGGAGTGCAATGTGCCAGGGCTATCAGAGTTTCAATGGGAAGATTATTCCTTTCAGGGAAAAGTGATTCAAAAAATGGAGCTTTTGGTGTTGAGCACATTGGAATGGAATATGGGTATTATCACTCCCTTTGCTTTTCTTTCTTATTTCATCACAAATTTCTGCAACGAATCCCCATCAAGTCCTATTTTTTCCAAGACCATGCAACTCATCTTCACCACAATGAAAGAGGTCAATTTAATGGATCACAAACCGTCTGTTATTGCAGTAGCTGCTACTTTGGTGGCACTAGATCAACAATTGACCATAGAAGCAGTGGAGTTGAAGTTGAGTTCAATTCCTCAACATAGGTCTCTTGAACCTAAAGATGTATTTGCATGCTATAATCTAATTCAAAGATTATATGAGGAAGAGACAACAGACAATGAGCTTTTACATACACCGAATTCTTCTTCACTCATCCGATCTAGGCCAATTGACATGACAGAGAGCTCTCTAGTTACTTCTGCTTCTATGACAAAGAAAAGAAGACTCACATTCACTGATGATGAAGAAAGTAGTAAAGGGAAGTGA 1626 0.4127 MTNGRPQGVVFTDPRAFLNSSMANEIALLEALTVVTDKDGGQHMSRGKSPKGASGMRNETDLVVVPHVGRDVDAIIGPTMNKTSFNSIGGPDASQGYYVANFGSNEDTVSGPLSKKFNSNPQKETNRGVEGESPLRGGMFIPLLENLPASPMSLSRRRCKPKENLVNQSAPSKKVLKKMVLGAERVIKNRKRSEKHLLRLIHPFASRKTLGLKRRSLLCQENETCLEDEVSDEEYSFIQSQQDCGVSEDEHVGVLIEREIGFGFKKCGTLVFGDWIKRTRMDAINWILKTRATFGFRFQTAYLSVTYFDRFLSRRSIDVSSIAILPMSTLSEKYWAIRLLSIACLSLAAKMEECNVPGLSEFQWEDYSFQGKVIQKMELLVLSTLEWNMGIITPFAFLSYFITNFCNESPSSPIFSKTMQLIFTTMKEVNLMDHKPSVIAVAATLVALDQQLTIEAVELKLSSIPQHRSLEPKDVFACYNLIQRLYEEETTDNELLHTPNSSSLIRSRPIDMTESSLVTSASMTKKRRLTFTDDEESSKGK* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03025 541 MobiDBLite consensus disorder prediction 109 135 - -
Rops2g03025 541 CDD CYCLIN_AtCycD-like_rpt1 280 387 - -
Rops2g03025 541 PANTHER CYCLINS 199 484 IPR039361 -
Rops2g03025 541 ProSitePatterns Cyclins signature. 280 311 IPR006671 -
Rops2g03025 541 Gene3D - 385 502 - -
Rops2g03025 541 MobiDBLite consensus disorder prediction 109 127 - -
Rops2g03025 541 SMART cyclin_7 285 383 IPR013763 -
Rops2g03025 541 FunFam Cyclin-D5-1 391 479 - -
Rops2g03025 541 FunFam Cyclin-D5-1 275 390 - -
Rops2g03025 541 Pfam Cyclin, N-terminal domain 278 389 IPR006671 -
Rops2g03025 541 Pfam Cyclin, C-terminal domain 392 491 IPR004367 -
Rops2g03025 541 SUPERFAMILY Cyclin-like 375 487 IPR036915 -
Rops2g03025 541 CDD CYCLIN_AtCycD-like_rpt2 392 482 - -
Rops2g03025 541 Gene3D - 273 384 - -
Rops2g03025 541 SUPERFAMILY Cyclin-like 241 389 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03025 Rops-Chr2 53914306 53927021 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03025 217 464 Core Cell Cycle Gene Families AT4G37630 35.249 1.06e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03025 K18811 - gmx:100798728 459.144