Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03020 ATGTTGAGATTGAAACAGTTGGAGGTGGAAGTCTTGAGCTGTGCTCAGCACCGAAATGTTGTTATGCTGATTGGATTCTGTATAGAGGATAAGAGAAGACTACTGGTTTATGAATACATATGCAATGGATCATTGGATTCACATTTATATGGTCGACAAAGGGAACCATTAGAATGGTCTGCACGGCAAAAAATTGTTGTTGGAGCTGCTCGAGGGTTGCGATATCTTCATGAAGAGTGCAGAGTGTCCTGCATGCTACATGCTGCATCATTATGCATAAGTCGTGATCCTTATTCTAGACCACGCATGTCACAGGTTTTGCGAATACTGGAGGGTGACATGGTCATGGACACGAATAGCATGTCAACTCCTGCTTATGATGTAGGAAAACCTCTGGACCATGCATATTTGACTGAAAATGTTGCCTCTGGATAG 435 0.4276 MLRLKQLEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWSARQKIVVGAARGLRYLHEECRVSCMLHAASLCISRDPYSRPRMSQVLRILEGDMVMDTNSMSTPAYDVGKPLDHAYLTENVASG* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03020 144 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03020 144 PANTHER OS01G0750732 PROTEIN 8 87 - -
Rops2g03020 144 SUPERFAMILY Protein kinase-like (PK-like) 6 80 IPR011009 -
Rops2g03020 144 Gene3D Transferase(Phosphotransferase) domain 1 5 91 - -
Rops2g03020 144 Pfam Protein tyrosine and serine/threonine kinase 8 79 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03020 Rops-Chr2 53826273 53826707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03020 8 79 Receptor kinase-like Gene Family AT5G56890 62.162 1.67e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Rops2g03020 PK_Tyr_Ser-Thr 1.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03020 - - gmx:100783226 162.54