Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03010 ATGGATAGAGCCTCGGAAACCAACATTCCTTCAATGGCACAAGATACTTCTGGTGCTGATTCACATCATATACATCTTGGTCTAAAAAAAAATCAAGTTCGCTTGGTTAAAAGGAAAGACTGTGATCGCTATGAGGTTGCTCCAATCCAAGACCAACTACAATTTGATAAGGGTTTTTTTATAGTATTCCATGCATGCCAATTGTTGGTCCAAAAGAATGATGGAATTATATTGGTAGGGGTGGCGGGTCCTTCAGGGGCTGGGAAGACTGTGTTTACTGAAAAGATACTCAACTTCATGCCCAACAGTGCAGTCATTTCAATGGACAGCTACAATGATTCTAGCCTAGTAGTTGATGGAAACTTTGATGATCCACGCTTAACAGACTATGAAACGTTGCTTCAAAATGTACATGATTTAAAGGCGGGAAAGCCAGTGCAAGTTCCTATATATGATTTCAAATCCAGTTCACGTACAGGATACAGGACAGTTGAAGTACCAAGCTCTCGCATTGTGATTATAGAGGGCATTTATGCCTTGAGTGAGAGGTTGCGACCTCTACTGGACCTTCGAATATCTGTAACAGGTGGTGTTCACCTTGACCTTGTTAAACGAGTTATTCGTGATGTACAACGTGCTGGTCAGGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATATCCAATGTACAAGGCTTTTATTGAGCCAGATCTCCAGACAGCCCATATAAAAATCATCAACAAGTTCAATCCTTTTATCGGATTCCAAAGCCCTATTTACATATTAAAGTCAGCAAGGAATGTAACAGTGGATCAAGTTAAAGCTGTTCTCTCTGAAGATTTTGAGGAAACAACTGAGCAAACTTGTGACATATATCTTCTGCCACCGGGTGAAGATCCAGAAAGCTGCCAATCATATTTACGGATGCGAAATAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGACACTCCATTTGTCATATCACCAAGAATTACTTTTGCAGTCAGTGTGCGCCTTTTTGGTGGACTAATGGCCCTAGGATACACAATAGCAACCATCCTTAAAAGAAACAGTCGTGTCTTATCTGATGATAGGATTTGTGTGAAACTAGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTACAAGGAAGAGATCGCTTAGTTGTATTATACATAGCACAACAGATGGGTCTCGAAGGTTCCTATATTCCTCGTACCTACATTGAGCAGATTCAACTTGAAAAGCTTGTAACTGAGGTTACAGCCTTGCCAGATGATTTAAGGACAAAGCTCAGCCTTGATAAGGATTTGGTGTCAAGCCCCAAAGAAGCACCTTTTAGAGCCTCTACTGACTGGGTTCCCATGAGACATAAGCGTATAAGGAGTGATATGTCACAGTCATGGACAAATCAAAGGGACAAGAATCAAGCCGAAGTAAATGGACATGTTTCCAACAATCAAGTGCTTCATGAAAGAAGTAATTCAGATTCTGCCACAAAACTGGCAAATCAGGGAGCCATTACACTACTTTCGGAACAAATTTCTTCCCTAAATGATAGAATGGATGAGTTTACAAATCGTATTGAAGAGCTGAACTTCAAGCTAACTATCAAGAAAAATTGTCCATGCCAACAAAATATGGCCTTGCAAGCTGAGGCATGCAATGTTTCTGCTCCCACCTCTTACTTCCCTAGTTTGGATAATGGTTCCCTAACTGGATCTTTAATGTCGAAATCCTCGTCCCCATCACAATTAGCCAAAGAGTCTCCTTTAATAGATGAGATATCAGGCATTGCACGGTGTCAGCGTCAGATCATGCATCAGTTGGACAATCTGAATAATCTTCTCTGTCGAAACTCGGGAGAGAAGTCTCATCCAACAAGAACCAACAAGAAAAGTGTAGCTACTCATTCAGATTCCACTGGACCTAATGTAATGGTGGCAGTGGCTATTGGTTGTTTGGGGATCTTCTTGATGAAGGGTTTGTTAACTTGA 2019 0.4086 MDRASETNIPSMAQDTSGADSHHIHLGLKKNQVRLVKRKDCDRYEVAPIQDQLQFDKGFFIVFHACQLLVQKNDGIILVGVAGPSGAGKTVFTEKILNFMPNSAVISMDSYNDSSLVVDGNFDDPRLTDYETLLQNVHDLKAGKPVQVPIYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRISVTGGVHLDLVKRVIRDVQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFIGFQSPIYILKSARNVTVDQVKAVLSEDFEETTEQTCDIYLLPPGEDPESCQSYLRMRNKDGKYSLMFEEWVTDTPFVISPRITFAVSVRLFGGLMALGYTIATILKRNSRVLSDDRICVKLDWLEQLNRHYVQVQGRDRLVVLYIAQQMGLEGSYIPRTYIEQIQLEKLVTEVTALPDDLRTKLSLDKDLVSSPKEAPFRASTDWVPMRHKRIRSDMSQSWTNQRDKNQAEVNGHVSNNQVLHERSNSDSATKLANQGAITLLSEQISSLNDRMDEFTNRIEELNFKLTIKKNCPCQQNMALQAEACNVSAPTSYFPSLDNGSLTGSLMSKSSSPSQLAKESPLIDEISGIARCQRQIMHQLDNLNNLLCRNSGEKSHPTRTNKKSVATHSDSTGPNVMVAVAIGCLGIFLMKGLLT* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03010 672 CDD UMPK_like 78 250 - -
Rops2g03010 672 MobiDBLite consensus disorder prediction 1 21 - -
Rops2g03010 672 SUPERFAMILY CYTH-like phosphatases 273 418 IPR033469 -
Rops2g03010 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 247 IPR027417 -
Rops2g03010 672 ProSiteProfiles CYTH domain profile. 256 421 IPR023577 -
Rops2g03010 672 MobiDBLite consensus disorder prediction 628 647 - -
Rops2g03010 672 Pfam CYTH domain 280 415 IPR023577 -
Rops2g03010 672 PANTHER URIDINE KINASE 43 433 - -
Rops2g03010 672 Coils Coil 515 542 - -
Rops2g03010 672 Gene3D - 77 257 IPR027417 -
Rops2g03010 672 PRINTS Uridine kinase signature 235 248 - -
Rops2g03010 672 PRINTS Uridine kinase signature 143 158 - -
Rops2g03010 672 PRINTS Uridine kinase signature 76 93 - -
Rops2g03010 672 PRINTS Uridine kinase signature 199 209 - -
Rops2g03010 672 Pfam Phosphoribulokinase / Uridine kinase family 79 247 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03010 Rops-Chr2 53661330 53669835 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03010 77 247 PRT Gene Family AT5G40870 30.556 1.70e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03010 K00876 - gmx:100781286 1027.7