Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03009 ATGGTCCTCAGTGAGATCAGGGGAGTCCACTATCTAGCACCTGAAAATCAAATCCTAGTTCCACCCAACTTTGGTTTTTTGCAGTGTGACAACATCCCAAACATCCATCTAAATAGTCTCTTAAACCATTTTCCAAGCTGCTTCTTCCATTCTGCAGGCCATCAATTTGTTTCTCCTTCTTCATGCTTCACCACCAGTAACTCAACTTCTGATGAAGCTGATGAATATAAGCTCAACATAAACGATGAAAGGAAACAAAGGCGAATGATATCTAACAGAGAATCTGCCCGCAGATCAAGGATGAGGAAACAGAAGCACTTAAATGAACTATGGTCACAGGTGGTTAGACTCAGGACTGAGAACCACAACCTTATTGATAAACTGAACCATGTGTCTGAGTCCCATGACAGGGTTCTTCAAGAGAATGCACGCCTCAAAGAAGAAGCTTCTGATCTTCGCCAGTTGCTAGCAGAGCTCCAAATTGGCACTTCTTTTACTAGCACCATAGGAGATTTTGATGAGGATCCATGCAACACATCACAACTAAAAGCTGAGTCTTCAAATCAATCACTCACTTCTGTGGACATGCTACTAAATTGA 600 0.42 MVLSEIRGVHYLAPENQILVPPNFGFLQCDNIPNIHLNSLLNHFPSCFFHSAGHQFVSPSSCFTTSNSTSDEADEYKLNINDERKQRRMISNRESARRSRMRKQKHLNELWSQVVRLRTENHNLIDKLNHVSESHDRVLQENARLKEEASDLRQLLAELQIGTSFTSTIGDFDEDPCNTSQLKAESSNQSLTSVDMLLN* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03009 199 Coils Coil 128 162 - -
Rops2g03009 199 Coils Coil 199 199 - -
Rops2g03009 199 Gene3D - 82 137 - -
Rops2g03009 199 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 165 IPR044521 -
Rops2g03009 199 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Rops2g03009 199 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Rops2g03009 199 Pfam bZIP transcription factor 84 142 IPR004827 GO:0003700|GO:0006355
Rops2g03009 199 FunFam BZIP transcription factor 82 133 - -
Rops2g03009 199 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Rops2g03009 199 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Rops2g03009 199 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03009 Rops-Chr2 53627964 53628563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03009 36 166 bZIP Transcription Factor Family AT3G30530 54.967 2.40e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops2g03009 bZIP_1 1.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03009 - - gmx:778126 293.123