Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03007 ATGCCTTCTCCTGCATTGTTTTTTCTCTTCTTCCTGAATTGTTGCTTTGCAGCTCCTGCGTTTTATGACCAAAAAGTAGCTTTGGTATGCACCAACAGAACCGTATCATCTTTGCCTCAACGTCAGGTTTTCATAGCAAATTTTATGGCTGCGATGGACACGTTGACCCCACTGATCACAAGACAAAGATATGGGGCTGTTGTTAACGGTTCTCAAAACGTCACCGTTTATGCTTATGGTGAGTGTATGAAGGATCTTTCTCAATCAAATTGCGACTCGTGCCTTGCACAGTGCAAGACCCAAATCCTCAGTTGCCTTCCATTTCAGAAAGGAACACGTGGTGGCAGGCTCTTCTTTGATGGGTGCTACCTAAGGTATGATGACTACAACTTCTTCAATGAGAGTCTCAGTGATCAAGACGCGGCCGTGTGCGGCAACACCAGTGATTTTAGTGGGGAAAATGCCAATGTTTATAAAACCAATGCTTTGGAGTTAGTGAGAAATTTGAGTGTTTTAGCACCAAAAACTGATGGGTTCTATTCGGCTTATGTGAATAGAAAGAATGTTTCTGTTTATGGCTCCGCTCAGTGCTGGGAGTTTGTCAAAGGCAGTGCCTGCCAGAACTGTTTGGCAGATGCTGTTACTAGGATTACTCCCTGTGCCACAAAAGTAGAAGGGAGGGCATTGAATTCTGGTTGTTACTTGTGGTATTCCACACAAAAACTCTATAACAATTCAACCAATGATGCACCTGCAGGAAAACATGGACACCATAAAATAGCAACAATTCTGGCTGCATCTTCTGCTGCCGTGGCTCTTCTGCTGGTTGTAGCAGCAGTTATTTTTTTCATAAGGAAGAATGTATTGAAGAGGAGAAGAGAAAGAAGACAGGTTCGTGCAATTTTGGACCCAGAGAACAAGTCCAAGCTACATATGCCATATGAAATCCTTGAAAAAGCAACAAATTACTTCAACGATGCTAACAAGCTCGGGCAAGGAGGATCAGGTTCAGTTTATAAAGGAGTTATGCCAGACGGAAATACTGTGGCCATAAAAAGGCTTAGCTTTAACACAACACAATGGGCAGATCATTTCTTCAATGAGATTAATTTGATCAGTGGCATTCATCACAACAATCTTGCAAAGCTTTTGGGGTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTGCCTAACCAGAGCCTCCATGATCACCTTTCTGTTAGAAGGATTTGTCAACCGTTGAGTTGGGAAGTCAGGCATAAGATCATATTAGGAATTGCAGAGGGCATGGCCTTCCTTCATGAGGAATCACATGTGAGAATCATTCATAGAGACATAAAATTGAGCAACATTCTGCTCGAGGAGGACTTCACACCCAAGATTGCTGATTTCGGACTTGCTAGATTATTTCCAGAAGACAAGTCCCACATTAGCATAACCATTGCCGGGACACTGGGTTATATGGCTCCTGAGTATCTAGTTTGTGGGAAGTTGACTGAGAAAGCAGATGTTTACAGTTTCGGTGTTCTAGTCATTGAAATTGTGTCTGGCAAAAGAAACGGTTCCTTTGTTTTAAATTCATCCTCTCTCCTACAAACGGTTTGGAGCCTTTATGGTTCAAATAGGCTATCTGAGATTGTTGACCCCATCCTAGATGGTAATTTTCCCGCAGAAGAAGCATGCCAACTGCTTCAGATAGGGCTGCTTTGTGCACAAGCATCTGCAGAGTTGAGACCATCAATGTCAGAAGTTGTTAAAATTATTAATGAAAATCACGAAATTCTTCAGCCAACACAACCACCATTTATCAATTCTGGTAGCTCATAA 1839 0.4225 MPSPALFFLFFLNCCFAAPAFYDQKVALVCTNRTVSSLPQRQVFIANFMAAMDTLTPLITRQRYGAVVNGSQNVTVYAYGECMKDLSQSNCDSCLAQCKTQILSCLPFQKGTRGGRLFFDGCYLRYDDYNFFNESLSDQDAAVCGNTSDFSGENANVYKTNALELVRNLSVLAPKTDGFYSAYVNRKNVSVYGSAQCWEFVKGSACQNCLADAVTRITPCATKVEGRALNSGCYLWYSTQKLYNNSTNDAPAGKHGHHKIATILAASSAAVALLLVVAAVIFFIRKNVLKRRRERRQVRAILDPENKSKLHMPYEILEKATNYFNDANKLGQGGSGSVYKGVMPDGNTVAIKRLSFNTTQWADHFFNEINLISGIHHNNLAKLLGCSITGPESLLVYEYVPNQSLHDHLSVRRICQPLSWEVRHKIILGIAEGMAFLHEESHVRIIHRDIKLSNILLEEDFTPKIADFGLARLFPEDKSHISITIAGTLGYMAPEYLVCGKLTEKADVYSFGVLVIEIVSGKRNGSFVLNSSSLLQTVWSLYGSNRLSEIVDPILDGNFPAEEACQLLQIGLLCAQASAELRPSMSEVVKIINENHEILQPTQPPFINSGSS* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03007 612 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Rops2g03007 612 FunFam Cysteine-rich receptor-like protein kinase 2 23 131 - -
Rops2g03007 612 FunFam Cysteine-rich receptor-like protein kinase 2 290 399 - -
Rops2g03007 612 Gene3D Phosphorylase Kinase; domain 1 284 399 - -
Rops2g03007 612 CDD STKc_IRAK 330 594 - -
Rops2g03007 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Rops2g03007 612 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 77 611 - -
Rops2g03007 612 Gene3D Transferase(Phosphotransferase) domain 1 400 603 - -
Rops2g03007 612 Gene3D - 140 241 IPR038408 -
Rops2g03007 612 Gene3D - 24 131 IPR038408 -
Rops2g03007 612 ProSiteProfiles Gnk2-homologous domain profile. 23 131 IPR002902 -
Rops2g03007 612 ProSiteProfiles Protein kinase domain profile. 324 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03007 612 Pfam Protein kinase domain 325 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03007 612 SUPERFAMILY Protein kinase-like (PK-like) 308 605 IPR011009 -
Rops2g03007 612 Pfam Salt stress response/antifungal 144 239 IPR002902 -
Rops2g03007 612 Pfam Salt stress response/antifungal 30 129 IPR002902 -
Rops2g03007 612 ProSiteProfiles Gnk2-homologous domain profile. 138 242 IPR002902 -
Rops2g03007 612 FunFam Cysteine-rich receptor-like protein kinase 2 400 600 - -
Rops2g03007 612 SMART serkin_6 324 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g03007 612 FunFam Cysteine-rich receptor-like protein kinase 3 140 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03007 Rops-Chr2 53524313 53528403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03007 18 489 Receptor kinase-like Gene Family AT1G70530 59.579 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g03007 Pkinase 7.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03007 - - gmx:100787359 910.598