Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03000 ATGGATCTAATGCTTTCAATCAGATCTGTGCTCTTCTTCTTTAGCCGTTATTTGAATCATCGATTCGTTCTTTGTGGATCCAGTGCTTTCGAATCGTCTCAGATAAGGACCAACATCAGAGAGAGAGGGAATTCGATTTCACCTGAACTGAGAAGGATTGAGGTTGTGGCCATTAGGGTATGTACACCTAAAATGGTGGAAGCACTTATATGTGCACAAGATTGGATTAAAGGAACACGCTCTCCATTGCTTGCTGAAGAGAATTTTGAGGAGTTAGAGGAATTAGAGCAAGACATGGTTTCTTTTGCGCGATTCTTCTACCTAAAAATTTTGGTCATTGCAAGAGACTGGTTCTGGCGGCCATTCACAGTGTTATCACTTGATCCAGTCATTGGAGCAATCTCAGCGGGTAATGCAGTGGTTCTGAAACCATCAGAAATTGCTCCAGCAACATCATCACTACTTGCGAATTTGCTCAAAAATTACTCCACCCAAACTTTAGATCAAGTATAG 513 0.4152 MDLMLSIRSVLFFFSRYLNHRFVLCGSSAFESSQIRTNIRERGNSISPELRRIEVVAIRVCTPKMVEALICAQDWIKGTRSPLLAEENFEELEELEQDMVSFARFFYLKILVIARDWFWRPFTVLSLDPVIGAISAGNAVVLKPSEIAPATSSLLANLLKNYSTQTLDQV* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03000 170 SUPERFAMILY ALDH-like 119 163 IPR016161 GO:0016491
Rops2g03000 170 PANTHER ALDEHYDE DEHYDROGENASE 118 166 IPR012394 GO:0006081
Rops2g03000 170 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 124 165 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03000 Rops-Chr2 53318039 53322459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03000 108 162 Aldehyde Dehydrogenase Gene Family AT1G44170 61.818 1.08e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03000 K00128 - bvg:104890532 72.0182