Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02999 ATGCTTCCTCACATGGCAGCTCATCGAGAGGTGATAAAGCTTCAAATAGCAATGATTCAAACTGGAGCATGGATGCCTCTGCCCTCACAGTTAAGAGTTAAAACACTACATATCAGTTCTGCTATCTTGGCTGTTAAAAGTCCTTTCTTCTATAAGCTTTTCCCAAATGGTATGAGGGAGTCAGAGCAGAGACATGTCACCCTCAAAATTAATGCCTCTGAAGAAGCTGCTCTCATGGAGCTACTGAGTTTAATGTACAATGGTACCTTGAAGAGTGATACGATACCTGCTTTGTTGGATGTGTTGATGGCTGTTGACAAATTTGAAGTTGCTTTATGCATGAGATACTATAGCCGCAAAGCAGTATTTTACTGGTTGATACAAGGAAATAATAACCAACCTTCTGGCATCTCAATGATGTCACAAGAATCATCAGAGGCATTGGAAAAACATGCAAACTCAGGGTCTTGTGTGAAGGAGAGTAGTGAATATGTTTGA 498 0.4056 MLPHMAAHREVIKLQIAMIQTGAWMPLPSQLRVKTLHISSAILAVKSPFFYKLFPNGMRESEQRHVTLKINASEEAALMELLSLMYNGTLKSDTIPALLDVLMAVDKFEVALCMRYYSRKAVFYWLIQGNNNQPSGISMMSQESSEALEKHANSGSCVKESSEYV* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02999 165 SUPERFAMILY POZ domain 35 113 IPR011333 -
Rops2g02999 165 ProSiteProfiles BTB domain profile. 34 94 IPR000210 GO:0005515
Rops2g02999 165 Pfam BTB/POZ domain 34 111 IPR000210 GO:0005515
Rops2g02999 165 Gene3D Potassium Channel Kv1.1; Chain A 29 128 IPR011333 -
Rops2g02999 165 PANTHER OS02G0260700 PROTEIN 23 119 IPR045890 -
Rops2g02999 165 CDD BTB_POZ_ZBTB_KLHL-like 34 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02999 Rops-Chr2 53313046 53315809 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops2g02999 BTB 7.8e-10 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02999 - - rvl:131308113 141.354