Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02995 ATGAGTTTCTTTACAGGATCCTCTGGCCATACTTGGCAACCAACCATGACTTCAGATACTACTACTCCAAGTTATTGGTTGAACTGGAGGTTCTTCTTCTGTGCACTATGGATTTTAACCTCCATGGTTCTAGCATCTTGTTTAATATTGAAGCATGAAGGAGTCAATAAAAGAAGACCTGAAAGGGGAGAAAATCAGCATGGAGCAGTTGGATTGGTATATGAGGATGAAGCATGGAATACATGTCTTGGAGGAATCGATCCTTCCTGGCTGCTTATTTATAGAGTAATTTCTTTTGTTGTGCTTTTGGCTTTGATCATTGCTAATGTGGCTGCAGATGGAGGTGGCATATTTTACTTCTACACTCAATTGACCTTTACTTTGGTTACTATTTACTTTGGGCTCGGATCATTTTTCTCCTTATATGGATGTTTATACAAACACAATAAATTTGGGGACAGCACTGTCAATCGTGCTTCTTTAGATGCAGAACTAGGCACTTATAGGGTTCCCACTCGTGATGGAGCTTTAGATATGCCTAACCTGCCCAAAAGTCCTGATCAGGAATCTCATACTAGGAAAATTGCTGGTGTATGGGGTTACATTTTTCAAATAATTTATCAGACTTGTGCAGGTGCTGTAGTGCTCACTGACTCTGTTTTCTGGTTCTTCATTTATCCATTTCTTACATCCAAAGATTACAGTCTTGATTTTTTGATTTTTTGTATGCACACCATTAATGCTGTTTTCCTCCTTGGTGACACGTCATTGAATTGCATGAGATTTCCATTGTTTCGGTTTGCATATTTTGTCTTGTGGACGGCTATATTTGTGATTTTTCAGTGGATCATCCATGCTTGTATTTCAATTTGGTGGCCTTATCCTTTCCTTGACTTGTCATCACCATATTCACCCTTATGGTACTTGGCTGTGGCTCTTATGCATTTTCCATGCTATGGCTTCTTTGCTTTAATAGTGAGGTTGAAGCATTCCTGGTTATCAATATCTTTTCCTGGGTCTTCTCGGTTTGTACGAAAGTTCGATACAAGGAGAACAACTATGGATGAAGAAGATACATTGAGAGAGATGACCAACCTTGATTTGGACCATCAACCATTATGCATAGTTACACCAGATGAGGAAGCTTCTTTTGAGCTTAAATCTGGACTTATTCATTTGTTACCTTCATTCCATGGACTGTCGAGAGAGGATCCTAACAAGCATTTGAAGGAAATTCATGTGTTCCCAACTGGTGGCATTCCTGCCCCTGACAAGTTGCAGCCACTTGATACCATTTCTGCTGCATTATGGGGCTCAACACTGATATTACCAATCTTAATTATTACCCCCATTCTTTTCCGTGGAGTCAATGGAACAGTTGCTCATGAATTCATTATTGACATAAGAGGCTTAAAGAATACTGCTCGGATGGAGCCTGAAGATGTTGTAGAGCGACTTATGGACTATGGATTTCATGCAACAACAATATCATGGTCTGTGATTTGCACACTCATGATTGAACCCACTAAAAGTGAAAGCATTTCTACGGTGGTCGCCGCCTACGAACTCGTCGGCGGGAGTGAATCCATGGCGATGCCGCCAATGTGCGCCATCACTGCCTCCGCTATCCCCTCCCTTGTTCTTGCTCGCGGCCACTGGATCGAGTCTGTTCCGCAACTCCCACTCGTAGTGAGTGATTCAACTGAAGGAGTTGAGAAAATAAAAGAAGCAATCTAA 1737 0.4134 MSFFTGSSGHTWQPTMTSDTTTPSYWLNWRFFFCALWILTSMVLASCLILKHEGVNKRRPERGENQHGAVGLVYEDEAWNTCLGGIDPSWLLIYRVISFVVLLALIIANVAADGGGIFYFYTQLTFTLVTIYFGLGSFFSLYGCLYKHNKFGDSTVNRASLDAELGTYRVPTRDGALDMPNLPKSPDQESHTRKIAGVWGYIFQIIYQTCAGAVVLTDSVFWFFIYPFLTSKDYSLDFLIFCMHTINAVFLLGDTSLNCMRFPLFRFAYFVLWTAIFVIFQWIIHACISIWWPYPFLDLSSPYSPLWYLAVALMHFPCYGFFALIVRLKHSWLSISFPGSSRFVRKFDTRRTTMDEEDTLREMTNLDLDHQPLCIVTPDEEASFELKSGLIHLLPSFHGLSREDPNKHLKEIHVFPTGGIPAPDKLQPLDTISAALWGSTLILPILIITPILFRGVNGTVAHEFIIDIRGLKNTARMEPEDVVERLMDYGFHATTISWSVICTLMIEPTKSESISTVVAAYELVGGSESMAMPPMCAITASAIPSLVLARGHWIESVPQLPLVVSDSTEGVEKIKEAI* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02995 578 Gene3D Aspartate Aminotransferase, domain 1 446 524 IPR015422 GO:0003824
Rops2g02995 578 PANTHER UNCHARACTERIZED 39 340 - -
Rops2g02995 578 SUPERFAMILY Ribosomal protein L4 535 577 IPR023574 GO:0003735|GO:0005840|GO:0006412
Rops2g02995 578 Gene3D - 534 578 IPR023574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02995 Rops-Chr2 53230344 53245117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02995 535 578 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 63.636 9.58e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02995 - - gmx:100801420 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g02995 2 53230344 53245117 Rops2g02995 2 53230344 53245117 ECH
Rops2g02995 2 53230344 53245117 Rops2g04020 2 73519562 73522252 ECH
Rops2g02995 2 53230344 53245117 Rops10g00663 10 16370797 16374187 ECH
Rops1g00839 1 20618726 20624723 Rops2g02995 2 53230344 53245117 PCT