Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02992 ATGGAACTTAGCAATTCAGTTTTTTGGCTACTGGGTTTACTTCTTATGGTGTTGTTGGAGATGTCTTCTGCTGCTCTTTCTCCTTCTGGGATAAATTATGAAGTTGTAGCTCTGATGGCCATTAAGAATGACTTGATTGATCCCCACAATGTCTTGGAGAATTGGGATATTAATTCTGTTGATCCTTGTAGCTGGAGGATGATTACTTGTTCATCAGATGGTTATGTTTCTGCATTGGGATTGCCTAGTCAGAATTTGTCTGGTACTCTAGCTCCTGGGATTGGAAACCTTACTAACTTACAATCTGTGTTGCTTCAGAATAATGCCATTTCTGGTCCAATTCCTTCTGCCATAGGAAAGCTGGAAAAACTTCAGACACTTGACCTTTCCAATAATGCATTTAGTGGTGAGATACCCAGTTCTTTGGGAGGCCTCATCAACCTAAATTATTTGAGGTTGAATAATAACAGCCTTACAGGAGCTTGCCCTCAGTCTCTTAGCAACATCAATGGTCTAACCCTTGTGGACCTCTCTTATAACAATCTGAGTGGTACCTTGCCAAGAATATCAGCAAGAACATTCAAGATTGTGGGTAATCCATTAATTTGTGGTCCAAAAGCAAATAACTGTTCTAATGTGTTGCCAGAGCCACTTTCCTTCCCTCCAAATACTCTAAGAGATCAATCAGACTCTGGTACAAAAAGCCATCGTGTGGCAATTGCTTTTGGTGCGAGTTTTGGTTCTGCTTTTGTCATTGTGATTATTGTTGGGTTTCTCATTTGGTGGCGGTATAGACACAACCAGCAGATATTCTTTGACGTTAATGAGCAATATGACCCGGAAGTGCGTCTTGGTCATCTGAAAAGGTATTCATTCAAAGAGCTTCGAGCTGCAACAGATCATTTTAATTCAAAGAACATTTTAGGAACGGGTGGCTTTGGAATAGTCTACAAGGGGTGCATGAATGATGGTTCTGTTGTGGCAGTTAAAAGGTTGAAGGACTATAATGTTGCTGGTGGTGAGATTCAATTTCAAACAGAAGTTGAGACCATAAGTTTGGCTGTGCACAAGAATCTTCTGAGGCTCAGTGGATTTTGTAGTACTCAGAATGAAAGGCTCCTTGTGTATCCTTATATGTCCAATGGCAGCGTTGCCTCAAGATTAAAAGATCATATTCATGGCCATAAGGCTCTAGATTTTGGGAGAGCAGCAAACCAGAAAGGTGTCATGCTTGATTGGGTTAAGAAGCTCCACCAGGGTGGAAGATTAAGTCAAATGGTGGATAAAGATCTAAAGGGCAACTTTGACTTGATTGAATTGGAAGAGATGGTTCAGGTTGCACTGTTGTGTACACAATTTAATCCTTCCCACCGTCCCAAGATGTCAGAAGTATTAAAGATGCTGGAAGGTGATGGCTTAGCTGAGAGATGGGAAGCCTCACAACAGAAGATTGAGACACCAAAGTCCTGGTCTTGTGAAAACAACCCTCAAAGATATTCAGATTTTATTGAAGAATCTTCACTCATAATAGAAGCTATGGAGCTTTCTGGCCCTAGGTGA 1560 0.4103 MELSNSVFWLLGLLLMVLLEMSSAALSPSGINYEVVALMAIKNDLIDPHNVLENWDINSVDPCSWRMITCSSDGYVSALGLPSQNLSGTLAPGIGNLTNLQSVLLQNNAISGPIPSAIGKLEKLQTLDLSNNAFSGEIPSSLGGLINLNYLRLNNNSLTGACPQSLSNINGLTLVDLSYNNLSGTLPRISARTFKIVGNPLICGPKANNCSNVLPEPLSFPPNTLRDQSDSGTKSHRVAIAFGASFGSAFVIVIIVGFLIWWRYRHNQQIFFDVNEQYDPEVRLGHLKRYSFKELRAATDHFNSKNILGTGGFGIVYKGCMNDGSVVAVKRLKDYNVAGGEIQFQTEVETISLAVHKNLLRLSGFCSTQNERLLVYPYMSNGSVASRLKDHIHGHKALDFGRAANQKGVMLDWVKKLHQGGRLSQMVDKDLKGNFDLIELEEMVQVALLCTQFNPSHRPKMSEVLKMLEGDGLAERWEASQQKIETPKSWSCENNPQRYSDFIEESSLIIEAMELSGPR* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02992 519 Gene3D Transferase(Phosphotransferase) domain 1 387 487 - -
Rops2g02992 519 SUPERFAMILY Protein kinase-like (PK-like) 274 468 IPR011009 -
Rops2g02992 519 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
Rops2g02992 519 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 392 479 - -
Rops2g02992 519 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Rops2g02992 519 Pfam Protein kinase domain 303 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02992 519 ProSiteProfiles Protein kinase domain profile. 302 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02992 519 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Rops2g02992 519 SUPERFAMILY L domain-like 32 194 - -
Rops2g02992 519 FunFam Somatic embryogenesis receptor kinase 1 271 378 - -
Rops2g02992 519 FunFam Putative LRR receptor-like serine/threonine-protein kinase 31 212 - -
Rops2g02992 519 Pfam Leucine rich repeat 98 156 IPR001611 GO:0005515
Rops2g02992 519 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02992 Rops-Chr2 53165128 53171554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02992 392 519 Receptor kinase-like Gene Family AT1G60800 67.407 1.72e-53 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Rops2g02992 Pkinase 3.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02992 - - gmx:100806943 694.501