Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02984 ATGGAGAAGATCAGTGAACAAATGCGCAGTACTGGCTATGGCACAGCAGTTGTAGGAACAGGAGGACCTGACACTAACTATGGACTTGCCCAGTGCTATGGAGATCTTTCATTAATTGACTGTGGATTATGCTATGCCGAGGCACGCACGGTTCTTCCTCAATGCTTTCCTTACAATGGTGGTCGCATATATCTTGATGGTTGCTTCATGAGAGCTGAAAATTACAGCTTCTATAATGAGTATATAGGACCAGGAGACAAGGCTGTTTGTGGAAACACAACCAAGAAGAACCGAAGTTTTCAAGTAGCTGCAAAGAAGGCAGTTATGAATGCAATTCAAGCTGCATCCAACAATAAAGGCTACGCAAAGGAGAAGGTTACTGTATCAGGAGCAGCAAATGAGTCAGCTTATGTTCTGGTTGATTGTTGGAGGAGTTTGGACACAAGATCTTGCAAAGCTTGTCTTGAGAATGCCTCTTCTTTGATACTGGGGTGCCTGCCCTGGTCAGAAGGGAGAGCATTGAACACTGGATGTTTCATAAGGTACTCAGACACTGATTTTCTTAACAAGGAACAGGAAAATGGAAGTTCAAGAGGGAAAGTAGTTGTAATAGCGGTTGCAGTAGTTAGTTCAGTGATTGTTTCGGGGGTTGGAATAGCTATTGGTGTTTATATCCACAAACATAGATATATTCAAAAGAAACGAATAGGTTCAAATGATGCAGAAAAGTTAGCTGAGACCCTTCACCACAATTGCTTGAACTTCAAGTACTCTACACTGGAGAAGTCTACTGAATCTTTTAATGAAGCTAACAAGCTTGGACAAGGAGGATTTGGAATGGTTTATAAAGGAGTTCTACCTGATGGAAGAGAGATTGCTATCAAGAGGTTATATTTCAATAACAGACATAGAGCAGCAGATTTCTACAATGAAGTCAACATAATTAGTAGTGTGGAACATAAGAATCTAGTCAGGTTGTTAGGATGCAGTTGTTCAGGACTTGAAAGCCTGCTTGTATATGAATTTCTTCCAAACATAAGTCTTGATCGCTTCATATTTGATAAAAACAAAGGTAGGGAACTAAACTGGGAGAAGAGATATAACATTATCATTGGAACAACTGAAGGATTGGTTTACCTGCATGAAAACTCCAAAATTAGGATAATTCACAGAGATATAAAAGCTAGCAACATCTTATTGGATGCAAAGCTTCATGCCAAAATTGCAGATTTTGGTTTAGTTAGGTCCCTTCAAGATGATAAGAGCCACATCAGTACAGCTATTGCTGGAACTTTGGGTTACATGGCTCCAGAGTACCTGATACATGGTCAGTTAACAAAGAAGGCAGATACATGGAAGCATTTTCAGTCAGGTACTACAGAACAGTTACTCAATCCACATCTAATGTTGGAAAACAACCACAGCACCAATGTCAAGAATGAGATTTTAAGAGTGGTGCATATAGGACTTCTTTGCACCCAAGAAATCCCTTCCTTGCGACCATCTATGTCAAAGGCACTAAAGATGCTAACAAAGAAGGAAGAGCACCTAGCAGCTCCCTCTAATCCACCCTTCATAGATGAAAGTATCATGGAACTCCATGAACAAAATGAAGATCCATTTTATCCTCTCAAAGCAGCAGACTCAATGGCTACTATGTCCCATAGCTCTTTCTATCCCAGATTGCAAGCAATGAATGTATCTGAATAA 1710 0.4012 MEKISEQMRSTGYGTAVVGTGGPDTNYGLAQCYGDLSLIDCGLCYAEARTVLPQCFPYNGGRIYLDGCFMRAENYSFYNEYIGPGDKAVCGNTTKKNRSFQVAAKKAVMNAIQAASNNKGYAKEKVTVSGAANESAYVLVDCWRSLDTRSCKACLENASSLILGCLPWSEGRALNTGCFIRYSDTDFLNKEQENGSSRGKVVVIAVAVVSSVIVSGVGIAIGVYIHKHRYIQKKRIGSNDAEKLAETLHHNCLNFKYSTLEKSTESFNEANKLGQGGFGMVYKGVLPDGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGLESLLVYEFLPNISLDRFIFDKNKGRELNWEKRYNIIIGTTEGLVYLHENSKIRIIHRDIKASNILLDAKLHAKIADFGLVRSLQDDKSHISTAIAGTLGYMAPEYLIHGQLTKKADTWKHFQSGTTEQLLNPHLMLENNHSTNVKNEILRVVHIGLLCTQEIPSLRPSMSKALKMLTKKEEHLAAPSNPPFIDESIMELHEQNEDPFYPLKAADSMATMSHSSFYPRLQAMNVSE* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02984 569 ProSitePatterns Protein kinases ATP-binding region signature. 273 295 IPR017441 GO:0005524
Rops2g02984 569 Gene3D Transferase(Phosphotransferase) domain 1 343 520 - -
Rops2g02984 569 Gene3D Phosphorylase Kinase; domain 1 227 342 - -
Rops2g02984 569 ProSiteProfiles Gnk2-homologous domain profile. 1 77 IPR002902 -
Rops2g02984 569 SMART serkin_6 267 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02984 569 FunFam Putative DUF26-domain receptor-like protein kinase family protein 235 342 - -
Rops2g02984 569 Gene3D - 87 187 IPR038408 -
Rops2g02984 569 Gene3D - 1 77 IPR038408 -
Rops2g02984 569 SUPERFAMILY Protein kinase-like (PK-like) 251 541 IPR011009 -
Rops2g02984 569 FunFam Os07g0541700 protein 343 431 - -
Rops2g02984 569 Pfam Protein kinase domain 268 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02984 569 ProSiteProfiles Gnk2-homologous domain profile. 82 187 IPR002902 -
Rops2g02984 569 FunFam Cysteine-rich receptor-like protein kinase 42 1 77 - -
Rops2g02984 569 ProSiteProfiles Protein kinase domain profile. 267 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02984 569 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 451 539 - -
Rops2g02984 569 FunFam Cysteine-rich receptor-like protein kinase 3 86 187 - -
Rops2g02984 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 388 400 IPR008271 GO:0004672|GO:0006468
Rops2g02984 569 Pfam Salt stress response/antifungal 13 75 IPR002902 -
Rops2g02984 569 Pfam Salt stress response/antifungal 90 184 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02984 Rops-Chr2 52970524 52978290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02984 1 561 Receptor kinase-like Gene Family AT1G70520 63.866 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g02984 Pkinase 4.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02984 - - gmx:100818343 938.717