Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02983 ATGCCTTCTCCAGCATCGTTTTTTCTCTTCTTCCTTTGTTGCTTTGCAGCTCCTGCGTTTTCTGACCCAAGAGCCCAAAAAGCAGCTTTGGTATGCACCAACAGAACCGCACCAATGCCTGATCGTCAAGTTTTTGTAGCAAACTTTTTGGCTGCCATGGATGCTTTAACCCCTATGATCACAAGACAAAAATATGGGGCAGTTGTTAACGGTTCTCAAAACTCCACTGTTTATGCTTTTGGTGAATGCATGAAGGATCTTTCTCAATCAGATTGCAACGTGTGTCTTGCACAGTGCAAGACCCAAATCCTCGTTTGCCTTCCATTTCAGAAAGGAACACGTGGTGGCAGGCTTTTCTTTGATGGGTGCTACCTAAGGTATGATGATTACAACTTCTTCAATGAGAGTCTCAGTGTTCAAGACACGGCCGTGTGTGGCAACAACACCAGTGATTTTAGTGGGAATGATGCCAATGTTTATAAAGCCAATGCTTTGGAGTTGGTGAGAAATTTGAGTGTGTTGGCACCAAAAATTGATGGGTTCTCTGTGGGCTCTGTGAATAGAAAGAATGTTTCTGTTTATGGGTTGGCTCAGTGTTGGAAGTTTGTCAAAGGCAGTGCCTGCCAGAACTGTTTGGCAGATGCTGTTACTAGGATTGCTTCTTGTAACACAAAAAAAGAAGGGAGGGTATTGAATTCTGGTTGTTACTTAAGGTATTCAACTAAAAAATTCTATAACAATTCAACCAATGATGCACCAGCAGGAAAACAAGGACACCGTAAAATAGCAACAATTCTGGCTGCATCTTCTGCTGCCGTGGCTCTTCTGCTGGTTGTAGCAGCAGTTGTTTTTTTCATAAGGAAAAATGTATTGAAGAGGAGAAGAGAAAGAAGACAGTTTGGTGCACTTTTGGACACTGTGAACAAGTCCAAGCTAAATACGCCATATGAAATCCTTGAAAAAGCAACAAATTACTTCAACGATGCCAATAAGCTCGGGCAAGGAGGATCAGGTTCAGTTTATAAAGGAGTTATGCCAGATGGAAATACTGTGGCCATAAAAAGGCTTAGCTTTAACACAACACAATGGGCAGATCATTTCTTCAATGAGGTTAATTTGATCAGTGGCATTCATCACAAAAATCTTGTAAAGCTTTTAGGGTGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTGCCTAACCTGAGCCTCCACGATCACCTTTCTGTTAGAAGGATTTCTCAACCACTGACTTGGGAAGTCAGACATAAGATCTTATTAGGAATTGCAGAGGGCATGGCCTACCTTCATGAGGAATCACATGTGAGAATCATTCATAGAGACATAAAATTGAGCAACATTCTGCTCGAGGAGGACTTCACCCCCAAGATTGCTGATTTTGGACTTGCTAGATTATTTCCAGAAGACAAGTCACACATTAGCACTGCCATTGCTGGGACATTGGGTTATATGGCTCCTGAGTATATAGTTTGTGGGAAGTTGACTGAGAAAGCAGATGTCTACAGTTTCGGAGTTCTGGTTGTTGAAATTGTGTCTGGCAAAAGAAACAGTCAATTTGTTCTAAACTCATCCTCTCTCCTACAAACGGTTTGGAGTCTTTATGGATCAAATAGACTTTCTGAGATTGTTGACCCTATCCTAGAGGGTAATTTCCCTGCAGAGGAAGCATGCCAACTGCTTCAGATAGGGTTGCTTTGTGCACAAGCATCTGCAGAGTTGAGACCATCAATGTCTGTTGTTGTTAAAATGATTAATGACAATCATGAAATTCCTCAGCCAACACAACCACCATTTATTAATTCTGGTAGTTCAGAGATCAACAAATCTAGTTTACCTGGATCTAATTTTCAGCCTGGATCCAACTCCCAGTCTTCAAAGGATACCATGACTGACAGTCTACTTGAGCCTAGATGA 1944 0.4162 MPSPASFFLFFLCCFAAPAFSDPRAQKAALVCTNRTAPMPDRQVFVANFLAAMDALTPMITRQKYGAVVNGSQNSTVYAFGECMKDLSQSDCNVCLAQCKTQILVCLPFQKGTRGGRLFFDGCYLRYDDYNFFNESLSVQDTAVCGNNTSDFSGNDANVYKANALELVRNLSVLAPKIDGFSVGSVNRKNVSVYGLAQCWKFVKGSACQNCLADAVTRIASCNTKKEGRVLNSGCYLRYSTKKFYNNSTNDAPAGKQGHRKIATILAASSAAVALLLVVAAVVFFIRKNVLKRRRERRQFGALLDTVNKSKLNTPYEILEKATNYFNDANKLGQGGSGSVYKGVMPDGNTVAIKRLSFNTTQWADHFFNEVNLISGIHHKNLVKLLGCSITGPESLLVYEYVPNLSLHDHLSVRRISQPLTWEVRHKILLGIAEGMAYLHEESHVRIIHRDIKLSNILLEEDFTPKIADFGLARLFPEDKSHISTAIAGTLGYMAPEYIVCGKLTEKADVYSFGVLVVEIVSGKRNSQFVLNSSSLLQTVWSLYGSNRLSEIVDPILEGNFPAEEACQLLQIGLLCAQASAELRPSMSVVVKMINDNHEIPQPTQPPFINSGSSEINKSSLPGSNFQPGSNSQSSKDTMTDSLLEPR* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02983 647 CDD STKc_IRAK 332 595 - -
Rops2g02983 647 FunFam Putative DUF26-domain receptor-like protein kinase family protein 285 401 - -
Rops2g02983 647 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Rops2g02983 647 Pfam Protein kinase domain 327 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02983 647 ProSiteProfiles Protein kinase domain profile. 326 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02983 647 SUPERFAMILY Protein kinase-like (PK-like) 314 622 IPR011009 -
Rops2g02983 647 Pfam Salt stress response/antifungal 38 130 IPR002902 -
Rops2g02983 647 Pfam Salt stress response/antifungal 145 241 IPR002902 -
Rops2g02983 647 MobiDBLite consensus disorder prediction 601 647 - -
Rops2g02983 647 FunFam Cysteine-rich receptor-like protein kinase 2 402 602 - -
Rops2g02983 647 ProSiteProfiles Gnk2-homologous domain profile. 140 244 IPR002902 -
Rops2g02983 647 Gene3D Phosphorylase Kinase; domain 1 286 401 - -
Rops2g02983 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Rops2g02983 647 FunFam Cysteine-rich receptor-like protein kinase 3 141 244 - -
Rops2g02983 647 Gene3D Transferase(Phosphotransferase) domain 1 402 605 - -
Rops2g02983 647 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
Rops2g02983 647 SMART serkin_6 326 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02983 647 FunFam Cysteine-rich receptor-like protein kinase 2 25 132 - -
Rops2g02983 647 MobiDBLite consensus disorder prediction 601 641 - -
Rops2g02983 647 Gene3D - 26 132 IPR038408 -
Rops2g02983 647 Gene3D - 141 244 IPR038408 -
Rops2g02983 647 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 78 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02983 Rops-Chr2 52888146 52891742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02983 17 491 Receptor kinase-like Gene Family AT1G70530 61.474 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g02983 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02983 - - gmx:100305402 1021.92