Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02982 ATGGATCTGGAACTTCCAGCATCTGTGATTGAATCTCAACAAAAAAAATTTGCTCTTGCTGTGGATTCTGAAAACAAGGCCACTGAATTTAGATTATTTTCCATAGCTAAGCCCCACATGAGAGCATTCCATCTTTCTTGGTTTTCCTTCTTTGCATGCTTTGTTTCTAGCTTTGCTGCAGCACCCTTGGTTCCAATCATTCGTGACAACCTCAACCTCACAGCCACTGATATTGGAAATGCTGGTGTTGCATCAGTTTCAGGTGCTGTTTTTGCTAGAATTGTCATGGGAACTGCCTGTGACTTAGTTGGACCACGTCTTGCCTCTGCCTCTTTAATCCTGATCACAGCACCAGCTGTTTACTTCACTTCCATTATCTCTTCAGCTACCTCCTTCCTCCTTGTCCGTTTCTTCACTGGCTTTTCCTTATCCACCTTTGTCTCTACACAATTCTGGATGAGTTCCATGTTTTCTACTAGAATAGTTGGTACAGCCAATGGACTTTCAGGTGGTTGGGGAAACCTTGGAGGAGGAGCTACCCAGCTCATCATGCCCCTTGTATTTTCCCTCATCAAAGATATTGGTGCTACCCAATTCACAGCATGGAGAATTGCATTCTTTGTTCCTGCTTTTTTGCAAATGATGACAGCATTTTCCATATTGATATTTGGCCAAGATTTGCCGGATGGGAATTTCCATCGCTTGAAGAAGTCAGGGGATAAACCAAAAGATGACTTATCAAAAGTGGTGTATCATGGGATTACAAATTATAGAGGGTGGATTCTAGCATTGACTTATGGCTATTGTTTTGGGGTAGAGTTGACCGTGGACAATATCGTAGCTGAATACTTCTATGATAGATTTAATCTGAACCTCCACACTGCTGGAATCATTGCTGCAAGCTTTGGCTTAGCTAATCTATTTTCTAGACCTGGAGGGGGTTATGTATCAGATATAATGGCAAAGAGGTTTGGAATGAGGGGTAGGTTATGGATCCTATGGCTGTGCCAAACCTTGGCTGGAGTTTTCTGCATAATCCTTGGCCTGGTGGGATCTTTAAGTGTATCCGTCGTTATTATGATAATATTCTCTGTGTTTGTCCAAGCTGCATGTGGGATGACCTATGGAATTGTTCCATTTGTCTCAAGAAGGTCGTTAGGGGTCATATCTGGTATGACAGGAGCAGGAGGCAATGTGGGGGCAGTTGTGACCCAGGTAATTTTCTTCAAAGGATCCAGGTTTTCAAAAGAAAGGGGAATAACTCTAATGGGTATCATGATCATAATATGCACCCTGCCAATATGCTTAATCTACTTTCCACAATGGGGTGGGATGTTTTTTGGTCCATCATCTAAAAATGTCACAGAAGAAGATTACTACTTGGCTGAGTGGAACTCAAAGGAGAAGGATAAAGGCTCCCATCATTCAAGCTTAAAATTTGCTGATAACAGCAAAACTGAGAGAGGCAGAAAACTGAGGAACTCAACCAAGCCTTCTGAGGAAACCGCACCTCCAAGTGTTTGA 1524 0.4252 MDLELPASVIESQQKKFALAVDSENKATEFRLFSIAKPHMRAFHLSWFSFFACFVSSFAAAPLVPIIRDNLNLTATDIGNAGVASVSGAVFARIVMGTACDLVGPRLASASLILITAPAVYFTSIISSATSFLLVRFFTGFSLSTFVSTQFWMSSMFSTRIVGTANGLSGGWGNLGGGATQLIMPLVFSLIKDIGATQFTAWRIAFFVPAFLQMMTAFSILIFGQDLPDGNFHRLKKSGDKPKDDLSKVVYHGITNYRGWILALTYGYCFGVELTVDNIVAEYFYDRFNLNLHTAGIIAASFGLANLFSRPGGGYVSDIMAKRFGMRGRLWILWLCQTLAGVFCIILGLVGSLSVSVVIMIIFSVFVQAACGMTYGIVPFVSRRSLGVISGMTGAGGNVGAVVTQVIFFKGSRFSKERGITLMGIMIIICTLPICLIYFPQWGGMFFGPSSKNVTEEDYYLAEWNSKEKDKGSHHSSLKFADNSKTERGRKLRNSTKPSEETAPPSV* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02982 507 Gene3D MFS general substrate transporter like domains 34 231 IPR036259 -
Rops2g02982 507 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 442 IPR020846 GO:0022857
Rops2g02982 507 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 11 491 IPR044772 GO:0015112
Rops2g02982 507 MobiDBLite consensus disorder prediction 467 497 - -
Rops2g02982 507 MobiDBLite consensus disorder prediction 467 507 - -
Rops2g02982 507 CDD MFS_NRT2_like 43 436 IPR044772 GO:0015112
Rops2g02982 507 Gene3D MFS general substrate transporter like domains 247 443 IPR036259 -
Rops2g02982 507 FunFam Nitrate transporter 2.1 243 444 - -
Rops2g02982 507 FunFam High affinity nitrate transporter 2.5 35 231 - -
Rops2g02982 507 Pfam Major Facilitator Superfamily 47 403 IPR011701 GO:0022857|GO:0055085
Rops2g02982 507 SUPERFAMILY MFS general substrate transporter 36 438 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02982 Rops-Chr2 52845447 52847575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02982 15 499 Inorganic Solute Cotransporters AT1G12940 72.165 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02982 K02575 - gmx:100787888 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g02982 2 52845447 52847575 Rops2g02982 2 52845447 52847575 ECH