Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02965 ATGGACGAGATCAACACCCTTTGTGGGATCGAAGCATGTGCTATAGTCTATAGCCCAAACAATCCTCAACCAGAGGTTTGGCCATCAGCTTGGGGAGTCCAAACGGTGTTGTCTAGGTTCTGGACAATGTCTGAACTGGAACAAAGTAGAAGGATGCTGAATCAGGAGAATTTCATGAAGCAAAGCATCCATAAAGCCCAAATGCAGTTGAAGAAACAAAGGAACGAAAACAAGAAGAAAGAGATAACCAATCTCATGTTTCAATGCCTGGATGCTGGCCAGATTTCTGGCAATGTTAACTTGACAGATCTCAATGATCTCTCATTGTTGATTGATCAGAACCTGAAGGAAATCGAAGGGAAGATCAATCAAATCCAAGATCCAGAGATTATTGAAAATGGAGCGGAAATTGTGAGTGGAGGAGAGATGATTGAAAATGGAGTAGGAATTGCGAGTGTAGGAGAGGAGGCACAGATGAGTCAAGACCAAAAAGTGGATGCCATGCAAATACAGGATTGGTCGATGGATTTCATCAATGATGGTTTTCTACCATTTGGTGATTTTAATGTTCAAAATGACCTTTGGCCAAATCCACAATTCCCTTGA 606 0.4175 MDEINTLCGIEACAIVYSPNNPQPEVWPSAWGVQTVLSRFWTMSELEQSRRMLNQENFMKQSIHKAQMQLKKQRNENKKKEITNLMFQCLDAGQISGNVNLTDLNDLSLLIDQNLKEIEGKINQIQDPEIIENGAEIVSGGEMIENGVGIASVGEEAQMSQDQKVDAMQIQDWSMDFINDGFLPFGDFNVQNDLWPNPQFP* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02965 201 SUPERFAMILY SRF-like 3 64 IPR036879 GO:0003677|GO:0046983
Rops2g02965 201 Coils Coil 63 85 - -
Rops2g02965 201 Gene3D - 1 88 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02965 Rops-Chr2 52428827 52429432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02965 1 142 Type I MADS-box Gene Family AT5G48670 43.750 4.45e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02965 - - gmx:100816084 189.504