Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02961 ATGCGGCCATGTTGGCCCTGCAGTTTGGCTATCTTTGGGTTCCATGTAGTCTCAAGAGCTGCCCTTAACATGGGCATTAGCAAACTTGTTTTCCCAGTCTACCGAAATATTATTGCTCTTCTTTTACTCCTTCCTTTTGCCTACTTCTTGGAAAAGAAGGAGAGACCTGCAATTACTTTAAACTTCCTCCTCCAGTTCTTTCTTCTGGCCCTTGTCGGGATTACAGCAAACCAAGGCTTCTACTTGCTTGGCCTGGACAACACATCCCCAACTTTTGCATCAGCAATACAAAACTCTGTCCCAGCAATTACATTTCTCATGGCAGCCGTACTCAGGATAGAGCAAGTGCGACTGAAGCGAAAGGATGGGATAGCAAAGGTGGCAGGAACCGCATTCTGTGTGGCTGGGGCAACCGTGATTACACTTTACAAGGGTCCAACTATATACAGCCCAGTTCCACCTCTAAACAAAGAACAACAACAACGCAGCACAGTTATTTGA 501 0.4611 MRPCWPCSLAIFGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAVLRIEQVRLKRKDGIAKVAGTAFCVAGATVITLYKGPTIYSPVPPLNKEQQQRSTVI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02961 166 PANTHER WAT1-RELATED PROTEIN 9 160 IPR030184 GO:0016020|GO:0022857
Rops2g02961 166 Pfam EamA-like transporter family 25 141 IPR000620 GO:0016020
Rops2g02961 166 SUPERFAMILY Multidrug resistance efflux transporter EmrE 34 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02961 Rops-Chr2 52285923 52286423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02961 13 158 Nodulin-like Gene Family AT1G75500 84.932 7.36e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02961 - - gmx:100798686 253.447