Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02960 ATGCAAGCACCAGTCCTCAAGAAGTACCCAGCGCGCCTCTCTGTCACTTCCTATACTTGTTTCTTTGGACTCATCCAATTTCTTATTATTGCTTTGATCTTTGAAAGAGATACTCAAGCTTGGATTTTCCACTCTGGTGGAGAAGTTTTCACAATTTTATACGCTGGAGTGGTGGCATCTAGAATTGCCTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTCGTTGCTGTGTATCAACCTGTTCAGACTCTTGTTGTCGCTATTATGGCTTCCATTGCTTTAGGCGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAGCATTGATCGTTGTGGGACTGTACCTAGTCTTGTGGGGTAAAAGTGAAGAGAAGAAGTTTGCAATGGAACAGCTTGCTATTACTTCCACTCCGGAGCATAGCAGCATCAGGTCCTCAAGCCATGCTAAAGCATCACTCACTCAGCCTCTACCCCTTCTCCCTCACCCTTCGTGGGCCCGTTGA 513 0.4698 MQAPVLKKYPARLSVTSYTCFFGLIQFLIIALIFERDTQAWIFHSGGEVFTILYAGVVASRIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASIALGEEFYLGGIIGAALIVVGLYLVLWGKSEEKKFAMEQLAITSTPEHSSIRSSSHAKASLTQPLPLLPHPSWAR* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02960 170 Pfam EamA-like transporter family 12 121 IPR000620 GO:0016020
Rops2g02960 170 PANTHER WAT1-RELATED PROTEIN 2 136 IPR030184 GO:0016020|GO:0022857
Rops2g02960 170 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02960 Rops-Chr2 52285316 52285828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02960 2 160 Nodulin-like Gene Family AT1G75500 77.301 1.54e-82 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02960 - - gmx:100786714 267.314