Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02959 ATGGCTTCCACCAAGGAACGTGAAAACTTCGTCTACATCGCCAAGCTTGCTGAACAAGCTGGACGCTATGAAGAAATGGTGGATGCAATGAAGAATGTGGCGAAGCTACATGTTGAGTCGACGATTGAGGAGAGAAACCTTCTATCAGTTGGGTACAAGAACGTAGTGGGTGCTCGTAGGGCTTCATGGAGGATTCTATCTTCTATTGAGCAAAAGGAAGAAGTCGCATGCAAGCTACATGCACTGTGGCATGTTGGCGCATCAAACAGAGAGCTACACAGGCCCGGGAGTAGGGGCTACAGGCGTGCAGTTTTGGCTGCCCCAGCTTCATGA 333 0.4985 MASTKERENFVYIAKLAEQAGRYEEMVDAMKNVAKLHVESTIEERNLLSVGYKNVVGARRASWRILSSIEQKEEVACKLHALWHVGASNRELHRPGSRGYRRAVLAAPAS* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02959 110 Gene3D - 1 104 IPR036815 -
Rops2g02959 110 SMART 1433_4 7 110 IPR023410 -
Rops2g02959 110 Coils Coil 13 33 - -
Rops2g02959 110 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Rops2g02959 110 SUPERFAMILY 14-3-3 protein 6 74 IPR036815 -
Rops2g02959 110 Pfam 14-3-3 protein 14 75 IPR023410 -
Rops2g02959 110 PANTHER 14-3-3 PROTEIN 7 76 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02959 Rops-Chr2 52284946 52285278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02959 1 75 14-3-3 family AT2G42590 76.000 2.60e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02959 K06630 - gmx:547891 134.42