Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02935 ATGACCCGCTTTTGGTGCAGCAATCGGCGGAGCCCCATCGGAAGGCATTTTCGTTCATCCTGGAAGGCGCATTTGGTGATTGGAAGTGGATTGTGTAGTTATAGAGGTATTGTTGAGGAGTTAAATATGGAGACAATCCTGGAAGAATCATTGGTTCAGTTGAATGATGATGTGGATGTGAATGAGGAGTGTCCAACGATAGATTCTGATAATGGGGTACAGAAAAATGGTGTTTATAAGAGTGTGACAGAGTTGAATGATGATGACATCTTACATTTAGAGTTTGGTAGTGAAGAGGAAGCTATAGAATTTTATAAAATGTATGCAATGTATCATGGATTTGTTATTAGGAAAGATGATGTGTATAGAGATGTGAAGGAGAAAGTTGTCATGCGGCAATTAGTATGCAATAGATTTGGTTTAAGAAACAAGAAACATATTGAAAGGGTGGACAAAATAAGAGACCATAAATCAATCACGCAGACGGATTGTGATGCAAATTTTAGGGTTCATTTTAACTACAGTAGTCTGAAATGGAGGGTTGTCTCTTTTCAAAATTCACATAACCATAAACTTACACCATCGAAACATGTTCACCTACTACCTACATATCGTAGGTTGACATTTGCAGACGAAGCTCAAGTTGATAGCTTGCATCATTATGGTGTGAGGATTTCTTACTTCTTGGACAAATTGGCTGATCTGTTTGTCAAGGATATTGTGCGGTTACATGGGGTGCCGCTTAACATTGTGTCCGATAGAGATCCCAGATTCACATCTAGGTTCTGGAGATCCATTCATCAGTCTTTTGGGACCAGATTGAGTTTTAGTATAGCTTACCACCCTCAGTCAGAGAGGACGATACTGACTTTAGATGATATGTTGAGGGCGTGTGTATTGGAGGACAAGGGAGTTGGGATAGATACTTGCCTTTAG 936 0.3974 MTRFWCSNRRSPIGRHFRSSWKAHLVIGSGLCSYRGIVEELNMETILEESLVQLNDDVDVNEECPTIDSDNGVQKNGVYKSVTELNDDDILHLEFGSEEEAIEFYKMYAMYHGFVIRKDDVYRDVKEKVVMRQLVCNRFGLRNKKHIERVDKIRDHKSITQTDCDANFRVHFNYSSLKWRVVSFQNSHNHKLTPSKHVHLLPTYRRLTFADEAQVDSLHHYGVRISYFLDKLADLFVKDIVRLHGVPLNIVSDRDPRFTSRFWRSIHQSFGTRLSFSIAYHPQSERTILTLDDMLRACVLEDKGVGIDTCL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02935 311 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 48 209 - -
Rops2g02935 311 Pfam FAR1 DNA-binding domain 103 193 IPR004330 -
Rops2g02935 311 Gene3D - 225 310 IPR036397 GO:0003676
Rops2g02935 311 SUPERFAMILY Ribonuclease H-like 232 303 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02935 Rops-Chr2 51939456 51946827 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops2g02935 FAR1 1.9e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02935 - - ccaj:109792835 196.823