Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02929 ATGGAAGAGAGCATTGACCTTGCAGCTTCAAGCCTTCTGTGTATGGAAAACAGCAACACATGCTTTGGTGATTTGGAATGTAAAGGGTCTCCTTCATGGGACCACAAAAACCTTAACTTTAACAATCAATGTCTGAGTAAGGACAACCATGGATCGGAACCTTTGGTGTGGTTTATCGTGCAGAGTGATGAAACTGTTTGGCTTTTGATTGAGAGGGAAAGAGGACATTTGCCCCGTGATGATTACTTGGAGAGGCTGCGTTGTGGAGACTTGGACTTGAGTGCTAGGAATGAGGCTCTTGATTGGGTTTGGAAGGCTCATGCATATTTTGGATTTGGACCCAGTAGCTTTTGTCTAGCTGTGAACTACTTGGATCGGTTCCTATCAGTGTACGAATTACCAAGAGGCCAAGGTTGGAGTGTGCATTTGGTAGCTGTAGCATGTTTGTCAATTGCTGCTAAAATGGAGGAGTCTAAAGTGCCTCAATTTGTATATTTACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCTAAAACCATTCAAAGAATGGAACTACTGGTGTTAAGCACATTGAGATGGAAAATGCAGGCTTTAACTCCATGTTCCTTTGTAGACTACTTCCTCAGAGAGATGAGTTGTGAGCAGCATCCAGCGAAGTCAACTATTTCAAGATCAATAGAGCTCATCCTTAACATAATTAGATGTGTTGATTTCTTGGAATTTAGGCCTTCTGAAATTGCTGCAGCAGTGGCAATTTTTGTTTCAAAGGAATTGCAAGCAAAAGAGATTGATGAAGCCTCAACTTGTTTTGTCATTGTAGAGAAGGAGAGAATTTTGAAGTGTCTTGACCTAATCAGAGATTTGTCATTGACTAAAGTTTCTGCTAATATAGGCAGCAACTTGGTGTCATTTGTTCCCCAAAGCCCTGTTGGGGTGTTGGATGCTCCATGCTTGAGCTCTAAAAGTGATGAATTAACAGTTGGATCATATACAAATTCTTCCCATTATAGTCCAAAAACTAAGAGGAACAAATCAGATGGATCTTCTGATGGGACTTACTAG 1062 0.4087 MEESIDLAASSLLCMENSNTCFGDLECKGSPSWDHKNLNFNNQCLSKDNHGSEPLVWFIVQSDETVWLLIERERGHLPRDDYLERLRCGDLDLSARNEALDWVWKAHAYFGFGPSSFCLAVNYLDRFLSVYELPRGQGWSVHLVAVACLSIAAKMEESKVPQFVYLQVGEPKFVFEAKTIQRMELLVLSTLRWKMQALTPCSFVDYFLREMSCEQHPAKSTISRSIELILNIIRCVDFLEFRPSEIAAAVAIFVSKELQAKEIDEASTCFVIVEKERILKCLDLIRDLSLTKVSANIGSNLVSFVPQSPVGVLDAPCLSSKSDELTVGSYTNSSHYSPKTKRNKSDGSSDGTY* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02929 353 SMART cyclin_7 101 189 IPR013763 -
Rops2g02929 353 SMART cyclin_7 206 287 IPR013763 -
Rops2g02929 353 SUPERFAMILY Cyclin-like 55 195 IPR036915 -
Rops2g02929 353 Pfam Cyclin, N-terminal domain 66 195 IPR006671 -
Rops2g02929 353 Gene3D - 79 196 - -
Rops2g02929 353 SMART Cyclin_C_2 198 308 IPR004367 -
Rops2g02929 353 FunFam D6-type cyclin 193 283 - -
Rops2g02929 353 Gene3D - 69 283 - -
Rops2g02929 353 PANTHER CYCLINS 63 286 IPR039361 -
Rops2g02929 353 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Rops2g02929 353 FunFam D2/4-type cyclin 79 192 - -
Rops2g02929 353 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Rops2g02929 353 Pfam Cyclin, C-terminal domain 199 291 IPR004367 -
Rops2g02929 353 MobiDBLite consensus disorder prediction 328 353 - -
Rops2g02929 353 CDD CYCLIN_AtCycD-like_rpt2 199 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02929 Rops-Chr2 51708113 51710086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02929 61 267 Core Cell Cycle Gene Families AT5G65420 57.895 1.88e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02929 K18810 - gmx:100800570 478.404