Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02928 ATGGATGTAATTTTTGAGGTGCAAAGAGGGAGGTCATTCACCATTGAAATAGGTTTCTTCGACACAGTCCTAGAGATCAAAGAGAAGGTGCAAAAATATCAAGGCATTCCCATCTCCAAACAAACTTTGATATTCAATGGCCAAGTTCTCCAAGATGATGGTGATGTTTGGAAATATGAAATCCTTCATAACTCACGCATTCAGCTTCTTGTAGCCCAGGATTCAGATAAACCCATCATGGTAAAGACTGAGGAGGTTTCTCCACCCACAAAAATTCACCTCAATGTCAAAATGTCTTCTTCCAAAATGAATGTTCCTGTTGAATTGGACATAAACGACACCGTCCTGAAACTGAAGGAGAGAATTCATGACATGGAATCTGTCCCATTGAACAGGCTCCTATTGCATGCAACAGGTAACGAATTGCATGATCATCAGTTGCTACGAGATTGTGACGTTTCAGATAACACTGAGATTGATGCGAGTTTGAGACAATTGCCCACAACTTCACCGGCAGCTGCGGTTACAGGTGGTGGTGGTGGTGGTGTAGGAGGATCAAAGAAGTTGAAGCTCATGGTGTTGCCGAAAAGTGGAACAAAGAAGATACCGGTAGAAGTGAATGCCTCTGACAATGTGGGAGAATTGAGGAAGGAATTGCAGAGGTTACATCAAAGGTTTCAGTTTCATCTTCCCCAAGATGGTTACTTTTTCATTTATAAACAGAATGTTATGGATGATGATAGGTCTTTCCGTTGGCACCATGTTGGGCAGGGTGATACCATTGAAATCTTTAATGGAAGTGTTACGGGTGGATCATGA 819 0.42 MDVIFEVQRGRSFTIEIGFFDTVLEIKEKVQKYQGIPISKQTLIFNGQVLQDDGDVWKYEILHNSRIQLLVAQDSDKPIMVKTEEVSPPTKIHLNVKMSSSKMNVPVELDINDTVLKLKERIHDMESVPLNRLLLHATGNELHDHQLLRDCDVSDNTEIDASLRQLPTTSPAAAVTGGGGGGVGGSKKLKLMVLPKSGTKKIPVEVNASDNVGELRKELQRLHQRFQFHLPQDGYFFIYKQNVMDDDRSFRWHHVGQGDTIEIFNGSVTGGS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02928 272 FunFam Ubiquitin-like superfamily protein 1 72 - -
Rops2g02928 272 CDD Ubl_ubiquitin_like 200 264 - -
Rops2g02928 272 ProSitePatterns Ubiquitin domain signature. 27 52 IPR019954 -
Rops2g02928 272 SMART ubq_7 191 266 IPR000626 GO:0005515
Rops2g02928 272 SMART ubq_7 1 72 IPR000626 GO:0005515
Rops2g02928 272 SMART ubq_7 92 164 IPR000626 GO:0005515
Rops2g02928 272 Gene3D - 189 265 - -
Rops2g02928 272 PANTHER UV EXCISION REPAIR PROTEIN RAD23 187 269 - -
Rops2g02928 272 SUPERFAMILY Ubiquitin-like 187 264 IPR029071 -
Rops2g02928 272 CDD Ubl_ubiquitin_like 94 159 - -
Rops2g02928 272 ProSiteProfiles Ubiquitin domain profile. 1 76 IPR000626 GO:0005515
Rops2g02928 272 ProSiteProfiles Ubiquitin domain profile. 92 165 IPR000626 GO:0005515
Rops2g02928 272 ProSiteProfiles Ubiquitin domain profile. 189 270 IPR000626 GO:0005515
Rops2g02928 272 SUPERFAMILY Ubiquitin-like 2 78 IPR029071 -
Rops2g02928 272 Gene3D - 91 162 - -
Rops2g02928 272 PRINTS Ubiquitin signature 11 31 IPR019956 -
Rops2g02928 272 PRINTS Ubiquitin signature 32 52 IPR019956 -
Rops2g02928 272 Pfam Ubiquitin family 6 73 IPR000626 GO:0005515
Rops2g02928 272 Pfam Ubiquitin family 94 165 IPR000626 GO:0005515
Rops2g02928 272 Pfam Ubiquitin family 198 262 IPR000626 GO:0005515
Rops2g02928 272 SUPERFAMILY Ubiquitin-like 86 170 IPR029071 -
Rops2g02928 272 Coils Coil 205 225 - -
Rops2g02928 272 Gene3D - 1 70 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02928 1 71 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 32.394 4.09e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02928 - - lang:109360845 397.897