Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02908 ATGGAGAAATTAGAGTGGTGGGGCAAGAGGGATGAAAGAAAAGAGAAGAAAAGAAACCCAAAAGTGGAATTGAACGGTAACCTGAGAAAAGAGTTCTCATACGATGATGATGTATTGGCATCACCATCACCAAGGGATGTCTTTGAGGTCCATATTTCTGCCACAGACTCGGATAGCACTGGAAGCAGCAATTACAGCCCTCGATCACAAGGGATGATGGCACAACAAAGGCAACATGGGAAAGAAGGACATGGTCAACAATGGAGGGCCATGATTGATGCCTTGAGGTTCAAGTCTGTTAGAAGATTCTCAACCATTCCTTTGCTTGCCGCAAGCTATGAGATCTCTAGGAGAAGCATAAGGAACAAGTTGGCTCGTATTCGAAATGACGATGAGAATGATTATGATAGTGCCATTGATATTGATGGTATTCCTACCAAGCCTTCTTGGAAGAATTTTAGTTACGCAGATCTTGCTGCTGCAACGGACGATTTCAGCCCAGAAAACGTGATTGGGAAAGGTGGTCATGCAGAAGTCTACAAAGGATGCTTACCTGATGGTCAAGTTGTAGCAGTAAAGAGGCTAATGAAGAACGAAAAGGAAGCTGAGGACAGAGCTGGTGATTTCTTGTCAGAGCTTGGGATTATTGCTCACATTAACCACCCAAATGCAACACTCCTCATTGGCTTTGGGATCGAAAATGGCCTCTACTTTGTCCTACAATTTGCCTCCAATGGCAGCCTTGCCTCTTTGCTCTTTGGTTCTGAATGCATGGAGTGGAAGGTAAGGTTCAAGGTAGCTGTTGGGGTTGCGAAAGGATTGCAGTACCTCCATCACGATTGTCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAATATATTACTCAACCAAAATAATGATGCCGAGATTTCAGATTTTGGATTGGCAAAGTGGCTCCCAGATAAGTGGGCCCACCATGTTGTCTTCCCGATTGAAGGCACATTCGGGTATTTGGCTCCAGAGTACTTTATGCATGGACTTGTGGATGAGAAGACTGATGTTTTCGCATTTGGGGTGTTGTTACTTGAGCTCATAACAGGTCGTCGTGCAGTTGATTCAAATAATAACCAAAGTCTTGTGATCTGGGCGAAACCACTGTTGGACGCAAAGCAGGTGGAGGAAATAGCAGACCCCAGATTAGAAGAGAAATATAATCCCACTGAAATGAAGCGTGCCATGGCAATAGCTTCAATGTGTATCCACCACATGTCCTCTAAAAGGCCATACATAAATCAGGTTGTGCAGCTACTGAAGGGTGAAGAGGTGGCTATTGACCTCAATCAAAAATCAATAGCTCCAAGGTCTCTCTTGTTAGATGCCTGTGACCTAGAAGATTATACTTGTTCTAATTATTTGAACGACCTCAATCGCCACAAGCAATTAATCATGGAGTGA 1440 0.4382 MEKLEWWGKRDERKEKKRNPKVELNGNLRKEFSYDDDVLASPSPRDVFEVHISATDSDSTGSSNYSPRSQGMMAQQRQHGKEGHGQQWRAMIDALRFKSVRRFSTIPLLAASYEISRRSIRNKLARIRNDDENDYDSAIDIDGIPTKPSWKNFSYADLAAATDDFSPENVIGKGGHAEVYKGCLPDGQVVAVKRLMKNEKEAEDRAGDFLSELGIIAHINHPNATLLIGFGIENGLYFVLQFASNGSLASLLFGSECMEWKVRFKVAVGVAKGLQYLHHDCPRRIIHRDIKASNILLNQNNDAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGLVDEKTDVFAFGVLLLELITGRRAVDSNNNQSLVIWAKPLLDAKQVEEIADPRLEEKYNPTEMKRAMAIASMCIHHMSSKRPYINQVVQLLKGEEVAIDLNQKSIAPRSLLLDACDLEDYTCSNYLNDLNRHKQLIME* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02908 479 ProSitePatterns Protein kinases ATP-binding region signature. 171 193 IPR017441 GO:0005524
Rops2g02908 479 MobiDBLite consensus disorder prediction 1 23 - -
Rops2g02908 479 SUPERFAMILY Protein kinase-like (PK-like) 149 437 IPR011009 -
Rops2g02908 479 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 244 446 - -
Rops2g02908 479 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 140 242 - -
Rops2g02908 479 Gene3D Transferase(Phosphotransferase) domain 1 243 447 - -
Rops2g02908 479 PANTHER OS08G0249100 PROTEIN 40 442 IPR046958 -
Rops2g02908 479 Pfam Protein kinase domain 168 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02908 479 SMART serkin_6 165 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02908 479 MobiDBLite consensus disorder prediction 52 83 - -
Rops2g02908 479 Gene3D Phosphorylase Kinase; domain 1 133 240 - -
Rops2g02908 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Rops2g02908 479 ProSiteProfiles Protein kinase domain profile. 165 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02908 479 MobiDBLite consensus disorder prediction 53 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02908 Rops-Chr2 51180433 51184873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02908 126 455 Trihelix Transcription Factor Family AT5G38560 40.351 3.65e-71 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Rops2g02908 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02908 - - gmx:100794225 741.88