Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02893 ATGGCGGTTTCACCAGAAATGGAGCATCCCAGGAAGGCTTTTGGATGGGCAGCTAGGGACACATCTGGAGTTCTCTCCCCCTTCAAATTTTCAAGAAGGGAAACTGGAGAGAAAGATGTAACTTTCAAAGTGTTGTATTGTGGTATATGCCACTCAGACCTCCACATGGTGAAGAACGAATGGGGCAATTCCACTTACCCCCTAGTACCTGGGCATGAGATTGTAGGTGAAGTAACAGAAGTTGGAAGCAAGGTAACAGTAATTAGCACATCTCCTAACAAAAAGAAGGAAGCCATTGAACATCTTGGAGCTGACTCATTTGTGGTCAGCAGTGACCAGGACCAAATGCAGGCTGTAATGGGCACCTTGGATGGTATCATTGATACAGTTTCTGCCGTCCATCCTCTGTTTCCTTTGATTGGTCTCTTGAAGCCTCATGGGAAACTTGTCATGGTTGGTGCTCCGGAGAAGCCTTTGGAGCTACCAGTATTCCCTTTACTTTTGGGGAGAAAGATAGTAGGTGGCAGTTGCATTGGAGGAATTAAGGAGACACAAGAAATGATTGATTTTGCTGCTAAATACAATGTAAAACCTGACATTGAAGTTATTCCTATAGATTATGTGAACACGGCAATGGAGCGCCTCCTTAAAGCAGATGTGAAATATCGATTTGTTATTGACATTGGGAACACACTTAAGCCAAGCTCTTAA 711 0.4388 MAVSPEMEHPRKAFGWAARDTSGVLSPFKFSRRETGEKDVTFKVLYCGICHSDLHMVKNEWGNSTYPLVPGHEIVGEVTEVGSKVTVISTSPNKKKEAIEHLGADSFVVSSDQDQMQAVMGTLDGIIDTVSAVHPLFPLIGLLKPHGKLVMVGAPEKPLELPVFPLLLGRKIVGGSCIGGIKETQEMIDFAAKYNVKPDIEVIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPSS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02893 236 Pfam Alcohol dehydrogenase GroES-like domain 38 87 IPR013154 -
Rops2g02893 236 Gene3D - 87 198 - -
Rops2g02893 236 FunFam Uncharacterized protein 2 72 - -
Rops2g02893 236 CDD CAD1 14 227 IPR047109 GO:0016616
Rops2g02893 236 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Rops2g02893 236 Pfam Zinc-binding dehydrogenase 82 192 IPR013149 -
Rops2g02893 236 PANTHER ALDEHYDE REDUCTASE 82 231 IPR047109 GO:0016616
Rops2g02893 236 FunFam Putative cinnamyl alcohol dehydrogenase 6 199 228 - -
Rops2g02893 236 Gene3D - 199 226 - -
Rops2g02893 236 Gene3D - 5 86 - -
Rops2g02893 236 FunFam Cinnamyl alcohol dehydrogenase 71 198 - -
Rops2g02893 236 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 81 196 IPR036291 -
Rops2g02893 236 SUPERFAMILY GroES-like 8 86 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02893 Rops-Chr2 50782162 50785672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02893 11 90 Monolignol Biosynthesis Gene Families AT4G37990 81.250 3.43e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02893 K23232 - gmx:100809071 278.87