Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02877 ATGCAGCAAACTGCGGATGTCCAGATGCCACAATCTGAGGATTTACAATCATCACTCAACTTGAAGAAAGATGGCTCTTATAAAGGGGGATTATCTCCTAATGCCACTTCTTATGCCCCTTCTATTTTATCAGAGATGATTGAACCAACTGTGACCACATCTTCTGGTGGCTCAGGCAGTAGTATTGGAAGAACTTGTTCCCTATCAACAAGAAATCATGGTCAAAAAAGAAAAGGGACAGATGTAGAAGTAATAGAGGAACAAAGTGAGCTGATGGAAACAAGACATCTCAGAGGGCAGGGTCTTCCAAAAGGAATCGTGCAGCTGAAGTGCATAATCTATCTGAAAGGAGAAGAAGAGATGGGATCAATGAGAAGAAGAGATAAGATCAATGAGAAGATGAGAGCATTGCAGCAACTGCTACCTAACTGTACCAAGCGAGTGAATGTATTTGGATATGGTTCCCAGCTAGCTCAACAAAGTGAAATAATGATTGCACCTAGCAATGGCAGTGGACCCATGAGTGGAGCAGCTAATATTGACGATGTTGTGAGTGGTAAAATGGACGCTAGAAGCTTTGGGAGGGAATTTAATCATAAAGAAATGGAGATAAAGAAGCTTCAGGCTCAAGCAAAAGAAATGGATGACTTTATCAATACTCACAAGAGAGCTGATTCTTATATTAATCCATCCTTCAACCCTCCATCCTTCCCTACTTATTATACCCCATCTATTCAGCCACCTCCGTCACCTTTCTACTCATCCTATAATTTTCCTCCAAATTTTAACAAAGATATACCATTTGGTTACAGACCTAACACTCATCAAGCCACTACTTCTAAACAAAAGGATAAAACACCAAAGATGAGCATTTCTTTCTCGGACTCTCAAGAAACCCTTGAACCGCCTCAGAATAGGATCTCAAAGCAAGAATCAAACATTATCCCTTCTTAA 954 0.4036 MQQTADVQMPQSEDLQSSLNLKKDGSYKGGLSPNATSYAPSILSEMIEPTVTTSSGGSGSSIGRTCSLSTRNHGQKRKGTDVEVIEEQSELMETRHLRGQGLPKGIVQLKCIIYLKGEEEMGSMRRRDKINEKMRALQQLLPNCTKRVNVFGYGSQLAQQSEIMIAPSNGSGPMSGAANIDDVVSGKMDARSFGREFNHKEMEIKKLQAQAKEMDDFINTHKRADSYINPSFNPPSFPTYYTPSIQPPPSPFYSSYNFPPNFNKDIPFGYRPNTHQATTSKQKDKTPKMSISFSDSQETLEPPQNRISKQESNIIPS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02877 317 Gene3D - 124 216 IPR036638 GO:0046983
Rops2g02877 317 MobiDBLite consensus disorder prediction 264 317 - -
Rops2g02877 317 MobiDBLite consensus disorder prediction 50 73 - -
Rops2g02877 317 MobiDBLite consensus disorder prediction 50 79 - -
Rops2g02877 317 MobiDBLite consensus disorder prediction 1 33 - -
Rops2g02877 317 MobiDBLite consensus disorder prediction 272 317 - -
Rops2g02877 317 PANTHER TRANSCRIPTION FACTOR PIF3 125 146 IPR044273 GO:0003700|GO:0006355
Rops2g02877 317 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02877 Rops-Chr2 50529756 50533728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02877 48 146 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 35.849 1.55e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02877 K16189 - gmx:100811345 94.7449