Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02875 ATGAGGTTCTATGTGAGGGACCTTTTGACAAGGATGAAGATTGGTGATTTGGGTATGAAGAAACAAGCCTTAAGGAACCTTCTAGAGGTTGTTTTAGAGGATGATAAGTATGTTAAAGTGGTTGTAGATGCTGGTGATGTTGTTCATTTGTTGGTGGGTTTTCTTGGTTCAGCTGAGGTGAAAATCCAAAAGGAAAGTGCTAAGGTGGTTTCTCTTGTTGCAAGTTTTGATTCCTATAAAGGGGTTTTGGTTGGTGTTGGGGTTATTGCACCTTTGATTCGGGTTTTGGATTGTGGGAATGAGTTGGATAATGGTTGGTTTGTTTCGGCTCATGGAGGTGTCATTGCCTTGTTGAATATTTGTGGGAATGAAGATTGTAAAGGGGATTTGGTTGGTCTTGCTTGTGGGGTGTTGAGAAATCTTGTTGGTGTTGGCGAAATAAAGAGGTTTATGGTTGAGGAAGGTGTTGTGTCCACTTTTATCATGTGGTGGTGGGAGAGGTGGTGGTGGTGCCATCGGAGACGACGGTGA 531 0.4294 MRFYVRDLLTRMKIGDLGMKKQALRNLLEVVLEDDKYVKVVVDAGDVVHLLVGFLGSAEVKIQKESAKVVSLVASFDSYKGVLVGVGVIAPLIRVLDCGNELDNGWFVSAHGGVIALLNICGNEDCKGDLVGLACGVLRNLVGVGEIKRFMVEEGVVSTFIMWWWERWWWCHRRRR* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02875 176 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 112 141 IPR000225 GO:0005515
Rops2g02875 176 SUPERFAMILY ARM repeat 6 161 IPR016024 -
Rops2g02875 176 Gene3D - 3 162 IPR011989 -
Rops2g02875 176 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02875 Rops-Chr2 50479482 50480012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02875 16 102 U-box Gene Family AT3G07360 27.586 2.21e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02875 - - psat:127100726 234.187