Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02854 ATGGATCCTCCATCAAATTTTGTTAGAGTAGAGATGTTTCCTAGTGGGTACCTGATACAACCTCGTGAAGGAGGTGGTTCCCTCATCCGCATTGATAATCATATGAATTTGGAGTCGTGGAGTGTGCCAGGAGTGCTGCGTCCACTGCATGAAGCGTCAACAGTGCTGGCTCAGAAGACAACTATGGCGGCCCTACGTCAGCCAAGGCAGGTTTCGCATGAGGTTCATGCTGTTATGCACTCGAAGTTGAATCCTGGCACGGTTCTCTTACAGCAATCTCCCTTGTCTCTTGCAAAAGCTTTAAAGAACCCTGTAGAATTGGATGGGTTAAGAAAGGCACATATTTGGTAG 351 0.4729 MDPPSNFVRVEMFPSGYLIQPREGGGSLIRIDNHMNLESWSVPGVLRPLHEASTVLAQKTTMAALRQPRQVSHEVHAVMHSKLNPGTVLLQQSPLSLAKALKNPVELDGLRKAHIW* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02854 116 ProSiteProfiles START domain profile. 1 49 IPR002913 GO:0008289
Rops2g02854 116 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 3 83 IPR044830 GO:0003700
Rops2g02854 116 Pfam START domain 3 69 IPR002913 GO:0008289
Rops2g02854 116 SUPERFAMILY Bet v1-like 3 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02854 Rops-Chr2 49940755 49941553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02854 1 75 Homeobox Transcription Factor Family AT4G32880 62.667 2.05e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02854 K09338 - csav:115707515 112.849