Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02850 ATGAGAACAATGTACTGGTATTTGGCAATTAATGCTAAGTGTTTCTGCATTTGCTGCTGTGGATTGATATTCAAGTCATCAAGTACACCCAACAACATATTAGAGGGGCACCAGATTTACATACCGTTGAGCAGACATGGGACTATTCTACTCTCAGGGCTTGCAGAACTTTACCAACAGATGCTTGCCAAAGCTTTAGCTCATTACTTTGAGGCCAAATTGCTTCTATTAGATTTAATTGACTTTTCATTGAAGATTCAGAGTAGATATGGCTCTGGCAACAAAGAGTCTCCCTGCCGCCAGTACAATCCATGTGGTTGCCAATCAGCTTTGGAAAGTAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTTCTTCTTGGAAGGTCTGATGTATCTGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGCAAGCATGAATATCTTGGAGAGTTAATTTCTCATAGGGAAGCAAATAAGCGAGGAAATATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCGTACCGAAAGGGTGATAAATTGAAGTTTGCAAGCTATTCTCCCGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGATCATAGTCTAATCACATGCTCTGCTCCATTAATTAACTAG 672 0.3973 MRTMYWYLAINAKCFCICCCGLIFKSSSTPNNILEGHQIYIPLSRHGTILLSGLAELYQQMLAKALAHYFEAKLLLLDLIDFSLKIQSRYGSGNKESPCRQYNPCGCQSALESSVLVFKMEPAVLLGRSDVSGWGAFLKNSVGKHEYLGELISHREANKRGNIYDRENSSFLFNLNDQFVLDAYRKGDKLKFASYSPDPNCYAKVIMVAGDHSLITCSAPLIN* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02850 223 SUPERFAMILY SET domain 33 211 IPR046341 -
Rops2g02850 223 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 118 214 IPR045318 GO:0006338|GO:0042054
Rops2g02850 223 Gene3D SET domain 81 222 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02850 Rops-Chr2 49787105 49790560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02850 105 208 C2H2 Transcription Factor Family AT2G23740 26.446 5.10e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02850 - - bvg:104893011 179.489