Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02849 ATGGGTGCTGGAGGTCCTGATGATGAGGATAACAGGTGGCCACCATGGTTGAAGCCTCTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTTGCATGCTGATTCACACAAGAGTGAGTGCAATATGTATTGCTTGGATTGTATGAACGGTGCACTCTGCTCTCTTTGCCTTGCTTACCACAAAGATCACCGTGCTATTCAGATAAGGAGGTCCTCATACCATGATGTGATTAGGGTCAATGAGATTCAGAAGGTGTTGGATATCACTGGGGTCCAAACTTACATTATCAACAGTGCAAGGGTCGTGTTCTTGAATGAGAGGCCTCAACCAAGGCCTGGGAAAGGCGTCACCAACACTTGTGAAGTTTGTGAGCGTAGCCTTCTCGATTCCTATCGATTCTGTTCGCTGGGTTGCAAGACTGTTGGAACTTCAAGGAATTTCCAGAAGAAAAAGTCAGCGGCAATGGCGTCAGACTCGGAGGATTCATACAGCAGTAGCAACAGCAACCATGGCAAGCTGAAGAGAAGCAACTTTCAGAGCTTCACACCGTCCACACCACCACCAACTTCAGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCTATGGGAGGACTAATCATGCAATACTAG 648 0.4722 MGAGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKTVGTSRNFQKKKSAAMASDSEDSYSSSNSNHGKLKRSNFQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIMQY* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02849 215 MobiDBLite consensus disorder prediction 149 192 - -
Rops2g02849 215 Pfam PLATZ transcription factor 69 139 IPR006734 -
Rops2g02849 215 MobiDBLite consensus disorder prediction 149 215 - -
Rops2g02849 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02849 Rops-Chr2 49691048 49693333 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Rops2g02849 PLATZ 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02849 - - vra:106774881 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g02849 2 49691048 49693333 Rops2g02849 2 49691048 49693333 ECH
Rops1g01242 1 28568831 28571020 Rops2g02849 2 49691048 49693333 PCT