Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02837 ATGAGGGATCTAAACAATGATCAACCTGCACATGAGAAGAGTAGACAGAAGAGTTATGCTGATGTTAGGCGAAGACCTTTAGAGTTTCAGGAGGGTGAACATGTGTTTTTGAGGGTTTCCCCTACCACAGGCATTGGTCGGGCCATTCGGGCCAAGAAGCTAAATCCTAGGTTCATTGGCCCGTTTCATATTCTATCTCGTGTTGGTCCCGTTGCTTATCAAATAGCCCTTCCACCTCACTTGTCTAATCTTCATAATGTCTTTCATGTGTCCCAGTTGCGTAAGTATATTCCTGATCCCTCACACATCATAGAGACCGAGTCGGTACAGTTGAGGGCTGATTTGACCTTTCAGGCTAGGCCGGCTAGAATTGGGGACCGTAGTGTGAAAATCCTACGGAGTAAGACCATACCCTTAGTGAAGGTATTTTGGGAGGGTCTAACTCCGGAAGAGGCTACGTGGGAGTTGGAGAGTGACATACGGGTGAAACACCCGGAGCTTTTTAACTCAGTTGCTGAAGCTTATAGTTCTTTGTTCCTCTCTTCTCAGGCCAAGATGTCAGATCGAGGTTCTTTCTCCCGCAACATGGCTGTGAAGAAGGAAGAAAAGGGTAGAAAGGAGCGAAAGGTTCCTTTGCTGAAGCTCTTCTCATTCGCTGACTTTTATGATTGTGTCTTGATGGCAATTGGATCTGTTGGGGCATGTGTTCATGGTGCCTCTGTGCCTGTTTTCTTTATCTTCTTTGGAAAGATCATTAATGTCATAGGCTTGGCTTACCTTTTTCCCAAGGAAGCTTCTCACAGAGTTGCCAAGTATTCGTTGGATTTTGTGTATCTAAGTATAGTGATATTATTTTCATCCTGGGCAGAGGTGGCTTGTTGGATGCATACTGGGGAGCGTCAAGCAGCAAAGATGAGGATGGCATATTTAAGGTCAATGTTGAACCAAGATATAAGTCTCTTTGACACCGAGGCATCAACGGGAGAGGTCATTTCTTCCATTACAAGTGACATCATCGTTGTTCAAGACGCATTATCTGAGAAGGTTGGGAACTTTATGCACTACATAAGCCGATTTATAGCGGGCTTTATCATTGGCTTTGTCAGAGTGTGGCAGATCAGTTTAGTGACACTTGCAATTGTACCCTTGATTGCCCTTGCTGGAGGTCTCTATGCATACGTGACAATTGGGCTTATTGCTAAAGTTCAGAAAGCATATGTGAGGGCTGGTGAAATCGCCGAAGAGGTGATAAGCAATGTAAGAACCGTACAAGCATTTGCAGGAGAAGAAAGAGCAGTCAGATCATATAAAGCGGCTCTAATGATCACTTATAGAAATGGTCGAAAAGCAGGCTTAGCAAAGGGTTTGGGATTAGGCTCTATGCACTGTGTCCTTTTTCTATCATGGGCTCTGCTTGCTTGGTTCACTAGCATTGTTGTTCACAAGAATATCGCCAATGGTGGGGATGCTTTCACTACAATGCTTAATGTGGTGATTTCAGGCCTGTCACTTGGGCAGGCAGCACCAGATATTTCTGCATTTATCCGAGCAAAGGCAGTAGCTTATCCTATCTTTGAGATGATTGAGAGGGGCACAGTCAGCAAAATCAGCTCAAAAACTGGTCGAAAATTAAGCAATGTGGAGGGTCATATCCAATTTATGGATGTTTGTTTCAGTTACCCATCTCGTCCTGATGCAGTTATCTTCAACAATCTTTGTCTTGAGATTCCTTCAGGGGAAATTTTGGCCCTTGTGGGAGGAAGTGGTTCCGGAAAGAGCACAGTTATATCATTGATTGAGCGTTTCTATGAACCACTTTCTGGTCAAATATTATTAGATGGGAACAACATCAGGGAACTTGATCTCAAATGGCTCAGACAACAAATTGGGCTAGTTAATCAAGAACCTGTACTTTTTGCTACAAGCATCAAGGAGAACATATTGTACGGAAAAGAAGATGCCACTCTTGAAGAACTAAATCTTGCTTTGAAGCTTTCTGATGCCCAGTCTTTCATTAACAATCTTCCTGATCGATTAGATACTCAGGTTGGTGAGAGAGGGATACAATTATCAGGGGGACAGAAGCAAAGGATTGCAATATCTCGTGCTATTGTTAAGAACCCATCAATTCTTTTATTAGATGAAGCAACTAGTGCTCTGGATGCAGAGTCTGAGAAGAGTGTACAGGAGGCTCTTGATCGTGTCATGCTTGGTAGAACAACTGTCATTGTGGCACATAGACTTTCTACCATTAGGAATGCAGATGTGATCGCTGTTGTTCAAGGAGGAAGCATTGTGGAAATTGGCAACCATGAAGAGCTCATTTCCAACCCAAACAGTGCTTATGCATCTATTGTTCAAGTCCAAGAGGAAGCCTCTTTTCAAGGCCACCCTTTTACGGATCCTTGCTTGGGACAGTCATCACGCATAATGTACTCAGAAGATAAATCCCAGACAACAAGCATTGGCGGTAGTTTTCGTTCAGATAAAGAATCTATTGGTCGTGCTTTTGCTGATGAAGCAGGAGGTGTTGGAAGGTCAAGGCATGTCTCAGCAAGAAGACTATATTCCATGATTGGTCCTGATTGGTTTTATGGGTTTTTTGGAACCTTCTGTGCATTTATTGCTGGAGCCTTGATGCCACTTTTTGCTCTTGGAATCTCTCATGCTCTTGTATCATATTACATGGACTGGGATACAACACGTCATGAAGTGAAAAAAGTTGCCTTCCTCTTTTGTGGGGCAGCAGTTGTAGCAGTCACTGCCTATGCCATTGAACATCTTTCTTTTGGAATAATGGGCGAACGACTTACCCTTCGTGTCAGAGAAATTATGTTTTCTGCTATTTTGAAGAATGAAATTGGCTGGTTTGATGATACAAGCAACGCAAGTTCTGTGCTTTCATCACGTTTAGAGACTGATGCAACTTTATTAAAAACTATAGTCGTTGATCGGTCTACAATTCTCTTACAGAATGTCGGTTTGGTTGTTACTTCATTTATTATTGCCTTCATTTTGAACTGGAGGATAACACTTGTTGTCTTGGCCACATATCCTTTGATCATTAGTGGTCACATCAGCGAGAAACTTTTCATGCAAGGCTTTGGTGGCAACCTGAGCAAAGCATATCTAAAAGCCAACATGTTAGTAGGGGAGGCTGTGAGTAATATACGCACTGTGGCTGCATTTTGCTCTGAAGAGAAGATCCTTGACCTTTATGCTGATGAACTTGTTGAGCCTTCAAAGCGTTCGTTCAAACGAGGCCAGATTGCTGGCATATTTTATGGCATTTGTCAATTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTGGTATGGATCTGTCTTGATGGAAAAGGAGCTTTCTAGCTTTAAATCAATTATGAAGTCATTTATGGTTTTAATTGTAACAGCATTGGCTATGGGAGAGACTTTGGCACTAGCACCAGACCTTCTGAAAGGGAATCAAATGGTTGCATCGGTTTTTGAAGTGATGGATAGAAAGACAGGAATAGTGCATGATGTTGGCGAAGAGTTGAAGACAGTTGAAGGAACAATTAAGCTAAAAAGAATCCATTTTAGCTACCCTTCAAGGCCAGACGTGTTTATTTTTAATGATTTCAATCTAACAGTGCCTTCAGGAAAGAGTATTGCCTTGGTGGGGCATAGTGGTTCTGGTAAAAGCTCAGTAATCTCCCTTATACTAAGATTTTATGATCCAACATCTGGGAAGGTGATGATTGATGGAAAAGACATCAAGAAAATTAATTTGAAATCCCTTAGGCAACATATTGGTCTTGTGCAACAAGAACCAGCTCTTTTTGCAACATCAATTTATGAAAATATTCTTTATGGGAAGGAAGGAGTATCTGAGTCAGAAGTAATTGAAGCAGCTAAACTTGCCAATGCTCATGATTTTATCGGTGCTCTTCCTGAAGGCTACTCCACCAAAGTAGGTGAAAGAGGAGTTCAACTATCTGGTGGCCAGAAACAAAGGGTAGCTATTGCCAGAGCTGTTTTGAAAAACCCTGAAATCTTGTTGCTAGATGAAGCCACCAGTGCATTGGATGTAGAGTCAGAGCGTGTGGTGCAACAAGCTCTAGACAAATTGATGAAGAACAGAACAACAGTTATGGTGGCACACAGGTTATCCACAATAAGAAATGCAGATCAAATATCAGTTTTACAAGATGGAAAGATAATTGAGCAAGGCACTCATTCAAGTCTTATGGAAAACACAGATGGAGCATACTTCAAATTAGTCAGCCTTCAACAACAGCAGCTTGTACAAGAACATTATGGATGA 4305 0.42 MRDLNNDQPAHEKSRQKSYADVRRRPLEFQEGEHVFLRVSPTTGIGRAIRAKKLNPRFIGPFHILSRVGPVAYQIALPPHLSNLHNVFHVSQLRKYIPDPSHIIETESVQLRADLTFQARPARIGDRSVKILRSKTIPLVKVFWEGLTPEEATWELESDIRVKHPELFNSVAEAYSSLFLSSQAKMSDRGSFSRNMAVKKEEKGRKERKVPLLKLFSFADFYDCVLMAIGSVGACVHGASVPVFFIFFGKIINVIGLAYLFPKEASHRVAKYSLDFVYLSIVILFSSWAEVACWMHTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISSITSDIIVVQDALSEKVGNFMHYISRFIAGFIIGFVRVWQISLVTLAIVPLIALAGGLYAYVTIGLIAKVQKAYVRAGEIAEEVISNVRTVQAFAGEERAVRSYKAALMITYRNGRKAGLAKGLGLGSMHCVLFLSWALLAWFTSIVVHKNIANGGDAFTTMLNVVISGLSLGQAAPDISAFIRAKAVAYPIFEMIERGTVSKISSKTGRKLSNVEGHIQFMDVCFSYPSRPDAVIFNNLCLEIPSGEILALVGGSGSGKSTVISLIERFYEPLSGQILLDGNNIRELDLKWLRQQIGLVNQEPVLFATSIKENILYGKEDATLEELNLALKLSDAQSFINNLPDRLDTQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMLGRTTVIVAHRLSTIRNADVIAVVQGGSIVEIGNHEELISNPNSAYASIVQVQEEASFQGHPFTDPCLGQSSRIMYSEDKSQTTSIGGSFRSDKESIGRAFADEAGGVGRSRHVSARRLYSMIGPDWFYGFFGTFCAFIAGALMPLFALGISHALVSYYMDWDTTRHEVKKVAFLFCGAAVVAVTAYAIEHLSFGIMGERLTLRVREIMFSAILKNEIGWFDDTSNASSVLSSRLETDATLLKTIVVDRSTILLQNVGLVVTSFIIAFILNWRITLVVLATYPLIISGHISEKLFMQGFGGNLSKAYLKANMLVGEAVSNIRTVAAFCSEEKILDLYADELVEPSKRSFKRGQIAGIFYGICQFFIFSSYGLALWYGSVLMEKELSSFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRKTGIVHDVGEELKTVEGTIKLKRIHFSYPSRPDVFIFNDFNLTVPSGKSIALVGHSGSGKSSVISLILRFYDPTSGKVMIDGKDIKKINLKSLRQHIGLVQQEPALFATSIYENILYGKEGVSESEVIEAAKLANAHDFIGALPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDKLMKNRTTVMVAHRLSTIRNADQISVLQDGKIIEQGTHSSLMENTDGAYFKLVSLQQQQLVQEHYG* 1435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02837 1434 ProSitePatterns ABC transporters family signature. 690 704 IPR017871 GO:0005524|GO:0016887
Rops2g02837 1434 FunFam ABC transporter B family member 2 987 1183 - -
Rops2g02837 1434 SUPERFAMILY ABC transporter transmembrane region 853 1167 IPR036640 GO:0005524|GO:0016020
Rops2g02837 1434 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 228 516 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops2g02837 1434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 543 789 IPR027417 -
Rops2g02837 1434 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 867 1153 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops2g02837 1434 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1180 1424 IPR027417 -
Rops2g02837 1434 CDD ABC_6TM_Pgp_ABCB1_D1_like 227 524 - -
Rops2g02837 1434 PANTHER ABC TRANSPORTER B FAMILY 193 790 IPR039421 -
Rops2g02837 1434 CDD ABC_MTABC3_MDL1_MDL2 1186 1419 - -
Rops2g02837 1434 CDD ABC_6TM_Pgp_ABCB1_D2_like 856 1171 - -
Rops2g02837 1434 MobiDBLite consensus disorder prediction 1 24 - -
Rops2g02837 1434 Gene3D - 541 790 IPR027417 -
Rops2g02837 1434 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 551 787 IPR003439 GO:0005524
Rops2g02837 1434 Pfam ABC transporter transmembrane region 867 1139 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops2g02837 1434 Pfam ABC transporter transmembrane region 229 500 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops2g02837 1434 ProSitePatterns ABC transporters family signature. 1325 1339 IPR017871 GO:0005524|GO:0016887
Rops2g02837 1434 SMART AAA_5 578 779 IPR003593 GO:0016887
Rops2g02837 1434 SMART AAA_5 1213 1399 IPR003593 GO:0016887
Rops2g02837 1434 CDD ABC_MTABC3_MDL1_MDL2 551 789 - -
Rops2g02837 1434 FunFam ABC transporter B family member 4 1176 1431 - -
Rops2g02837 1434 SUPERFAMILY Chromo domain-like 83 167 IPR016197 -
Rops2g02837 1434 Gene3D ABC transporter type 1, transmembrane domain 214 1155 IPR036640 GO:0005524|GO:0016020
Rops2g02837 1434 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1186 1422 IPR003439 GO:0005524
Rops2g02837 1434 FunFam ABC transporter B family member 1 214 550 - -
Rops2g02837 1434 Pfam ABC transporter 1205 1353 IPR003439 GO:0005524
Rops2g02837 1434 SUPERFAMILY ABC transporter transmembrane region 215 520 IPR036640 GO:0005524|GO:0016020
Rops2g02837 1434 Pfam ABC transporter 570 718 IPR003439 GO:0005524
Rops2g02837 1434 FunFam ABC transporter B family member 1 541 790 - -
Rops2g02837 1434 Gene3D - 1176 1433 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02837 Rops-Chr2 49405903 49420348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02837 198 1425 Calmodulin-binding Proteins AT2G36910 50.397 0.0 1211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02837 K05658 - gmx:100819045 2069.66