Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02828 ATGGAGCTATTCCCAGCACAGCCAGATTTGTCCTTGCAAATCAGCCTCCCAAACAGCAAACCCACATCAAGTTGGAGGAGAAGTGCAGAAGAAGAGATGGATTTGAGGTACTGGAAGAGAGCTTTAGATTCCAGAAACTCCTTAGTCAAAACAGATACCTTTTTCAACCTCTCCCTCTCCCATCAAAGTACTTCTTTAAACTCCAACCCCAACCTAATTCCCCACTTCCAAACCCCTAATAATGCCAATAACCCCTTCCAATCATTTCAGCAAAACCACTACTCTCACCACCATCAGCAACTCTTTCAGCACCACCAAAGCCCCAGCCAAGAGCTAGGTTTTCTCAGACCCATAAGAGGAATCCCAGTGTATCAAAACCCTCCTCCTGTCACATTTTTTCAACGGTCCCACCGTGCTGCTTCCAACACAACCACAGGATCCAGCCCTTTCGATTCTCAATCACTGATGCGGTCAAGGTTCCTGTCAAAACTTCCTACCAAACGTAGCATGAGAGCTCCTAGGATGCGTTGGACTACTACACTCCATGCTCGCTTTGTTCATGCCGTTGAGCTATTGGGTGGCCACGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTCACTTTATCACATGTTAAATCTCATTTGCAGATGTACCGGACGGTGAAAACTACAGATAGAGCAGCGGTATCATCAGGGCAATCTGATATATATGATAATGGCTCATCTGGAGATACTTCTGAAGACTTCATGTTTGACTTAAACAATTCAGAAAGGTCTGATCTATCTATTAAGTTGGCAAGAGCGAGTGCTAATCAAGATAAGGAAAATCGTGGCCTTTGGAGTAACACTTCCAGGGAAGCTTGGTTGCATGGTAAGCCAAAGATCGATTCTTTTGGAAACGTGCCTTCTGTTGAGGGAATGGATCCAAAGTGCCTTAGCAATGATAGAATATCAGATGGAAGCTCTTCCTCAAACATTTCAGGATCAAGCCCCAACAAGCCAAATTTAAACTTGGAATTCACCTTGGGCCGGCCACTTTGA 1059 0.4476 MELFPAQPDLSLQISLPNSKPTSSWRRSAEEEMDLRYWKRALDSRNSLVKTDTFFNLSLSHQSTSLNSNPNLIPHFQTPNNANNPFQSFQQNHYSHHHQQLFQHHQSPSQELGFLRPIRGIPVYQNPPPVTFFQRSHRAASNTTTGSSPFDSQSLMRSRFLSKLPTKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRTVKTTDRAAVSSGQSDIYDNGSSGDTSEDFMFDLNNSERSDLSIKLARASANQDKENRGLWSNTSREAWLHGKPKIDSFGNVPSVEGMDPKCLSNDRISDGSSSSNISGSSPNKPNLNLEFTLGRPL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02828 352 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 351 IPR044847 GO:0000976|GO:0006355|GO:0010158
Rops2g02828 352 NCBIfam myb-like DNA-binding domain, SHAQKYF class 173 226 IPR006447 GO:0003677
Rops2g02828 352 MobiDBLite consensus disorder prediction 321 343 - -
Rops2g02828 352 SUPERFAMILY Homeodomain-like 170 226 IPR009057 -
Rops2g02828 352 FunFam Myb family transcription factor 171 229 - -
Rops2g02828 352 Gene3D - 172 229 - -
Rops2g02828 352 Pfam Myb-like DNA-binding domain 174 225 IPR001005 -
Rops2g02828 352 MobiDBLite consensus disorder prediction 304 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02828 Rops-Chr2 49254870 49259759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02828 1 351 G2-like Transcription Factor Family AT4G17695 38.462 1.44e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops2g02828 Myb_DNA-binding 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02828 - - aprc:113868756 504.597