Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02825 ATGGCTCGCTCTGTGCCTTTGATTTCCTCCATTTTTGTCCTCCTCCTGCTTCTGGTGGCCACTGAAACGGGGCCAACAATGGTGGCAGAAGCAAGGACTTGTGAGTCTCAAAGTCACCGCTTCAAAGGACCATGTGTGAGCGACACCAATTGTGCTTCTGTTTGTAAAACGGAACGCTTCCCTGGGGGCCACTGTCGTGGCTTTCGTCGCAGATGCTTCTGCACTAGACATTGTTAA 237 0.5148 MARSVPLISSIFVLLLLLVATETGPTMVAEARTCESQSHRFKGPCVSDTNCASVCKTERFPGGHCRGFRRRCFCTRHC* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02825 78 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
Rops2g02825 78 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Rops2g02825 78 Gene3D - 32 78 IPR036574 -
Rops2g02825 78 CDD Knot1 43 75 IPR003614 GO:0006952
Rops2g02825 78 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Rops2g02825 78 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Rops2g02825 78 SMART gth_4 33 78 IPR003614 GO:0006952
Rops2g02825 78 Pfam Gamma-thionin family 32 78 - -
Rops2g02825 78 FunFam Defensin-like protein CAL1 32 78 - -
Rops2g02825 78 PANTHER DEFENSIN-LIKE PROTEIN 1 10 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02825 Rops-Chr2 49094885 49095338 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02825 1 78 Plant Defensins Gene Families AT2G02100 65.385 7.83e-33 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02825 - - gmx:100798577 104.76