Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02801 ATGGCTCCCAAGCACCCCACCAATGATTCTTCTTCTCTTCCATCAATACCTGTCAAAGAATCAAAGAAGCAACCAGGGAAGGTCTCTGGTTCCAAGGATTCCGCTCCATCACCCAAGTCTCACGATTCAGATTCTCCGGAGATTTCTCCGTCAGCGTCTCCGCCGCTTCAGCCGCCACCACCGCCCCGGCCGAAGCATCCATCGCCAAATAAAAGTTTAGCTCCATTGCCATCACCACCCTCTCCACCGCCACAATCACCACCCCCATCACCTTCTCCACCGCCACAATCACCACCCCCTCCACCCTCTCCGCCTCCACACTCACCACCACCGCCCTCTCCACCTCCACTGTCACCACCTCCACCCCCTTCACCACCACCACCCTCCACACCTCCGCCGCAACCGCCACCGCCGCCATTGCGGAAGGGCAACTCTTCGTTATTCTCTCCTACTTATGCACGCAGACAGTCGCCTCCACCGCAGGCGCAACATCCACCAGAGAGAGTTTCTTCTCCACCACCTTCCCGTAGTTCATCCTCCAATGATTCGAAACATCAAGCCATGCATGGTGGTGGTGGGTCCCATGCACAGTCAAGGGGTTCTTCTCCAAGTGACAATGCCGGAAAATACATTGGATATACCCTGGCTGGGGTTTTCTTCATTGCCTTGGTTGCTGTCATCGTTATTTTCACCTTTAGGAGGAAGAAATCAAAAGTGGATGTCCATGGTACACCCTATATGCCACCCCCTAATAATAATTTTCATTTAAAACTAGGTGCTGATGGGCATAACTATGTACAGCAGCCTGGTCCACAACCTTCCTTTGGAAACAATTATGGAAGTGGAAAGGTTGGAGGAAGCATGAAGCATCTAGGAGCTCCTTTAGACTCGCCCAAGCCCAGGAGTGCTCAGATAGCTTTCAGTTATGACATGGTCTTGGAAATAACTAATGCATTTTCTAGTCAAAACGTTATTGGGGAAGGAGGATTTGGGTCTGTCTACAAGGGTTGGCTACCAGATGGAAAAACAGTTGCAGTCAAGACGCTTAAGGCTGGAAGTGGGCAGGGAGATAGGGAATTCAGGGCTGAAGTGGAGATTATTAGCCGTGTTCATCATCGACATTTGGTGTCATTGGTTGGTTATTGCATATCTGAGCAGCAAAGAGTGCTTATCTATGAGTATATTCCTAATGGAACACTCCATCAGCACTTGCATGGAAATGGAATGCCAGTGTTGGATTGGGCCAATAGGCTGAAGATAGCAATTGGCGCTGCAAAGGGCCTGGCATATCTTCATGAGGACTGCAGCCAAAAGATTATTCACAGAGATATTAAGTCCGCAAACATACTTTTGGATCATGCTTTTGAGGCAAAGGTATCTGACTTTGGACTTGCAAGGCTAGCCGATGCTGCCAATACCCATGTTTCAACAAGGGTTATGGGGACCTTTGGGTACATGGCTCCAGAGTATGCAACTAGTGGAAAATTAACGGATAGATCGGATGTTTTCTCATTTGGGGTTGTCCTACTTGAGCTTGTAACTGGAAGGAAACCTGTTGATGAAACTCAACCTTTGGGAGATGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTTCGTGCATTTGAGACACGTGACTTTGGTGAACTAGTAGACCCAAGACTCGAAAATCACTATGTGGAGAATGAAATGTTTAGAATGATTGAGGCAGCTGCAGCTTGTGTTCGCCACTCAGCTCCTAGACGGCCTCGTATGTCTCAGGTGGTAAGAGCCTTAGATAGTGGAGATGAAATACCTGATCTATCAAATGGGGTGAAGTATGGTCAGAGCACTGTTTATGATTCTGGCCAATATGACAAAGACATTGAGCTATTCAGGAGGTTGGCCAATGGCAGCTTTGTTGGTTCTGATTTTGACATGTACAGTAGAGTATACAGTTTTTCAAGAGAGACTTCTACATCCCAACATGCGTGGTTGCGGAGTAGTTCTAGTGGCGAGTCAGAATCTACAGCTTTCAACAAGCATAGGAGCAGCACCGAATGA 2043 0.4826 MAPKHPTNDSSSLPSIPVKESKKQPGKVSGSKDSAPSPKSHDSDSPEISPSASPPLQPPPPPRPKHPSPNKSLAPLPSPPSPPPQSPPPSPSPPPQSPPPPPSPPPHSPPPPSPPPLSPPPPPSPPPPSTPPPQPPPPPLRKGNSSLFSPTYARRQSPPPQAQHPPERVSSPPPSRSSSSNDSKHQAMHGGGGSHAQSRGSSPSDNAGKYIGYTLAGVFFIALVAVIVIFTFRRKKSKVDVHGTPYMPPPNNNFHLKLGADGHNYVQQPGPQPSFGNNYGSGKVGGSMKHLGAPLDSPKPRSAQIAFSYDMVLEITNAFSSQNVIGEGGFGSVYKGWLPDGKTVAVKTLKAGSGQGDREFRAEVEIISRVHHRHLVSLVGYCISEQQRVLIYEYIPNGTLHQHLHGNGMPVLDWANRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDHAFEAKVSDFGLARLADAANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDETQPLGDESLVEWARPLLLRAFETRDFGELVDPRLENHYVENEMFRMIEAAAACVRHSAPRRPRMSQVVRALDSGDEIPDLSNGVKYGQSTVYDSGQYDKDIELFRRLANGSFVGSDFDMYSRVYSFSRETSTSQHAWLRSSSSGESESTAFNKHRSSTE* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02801 680 Pfam Protein tyrosine and serine/threonine kinase 322 592 IPR001245 GO:0004672|GO:0006468
Rops2g02801 680 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 219 637 IPR047117 -
Rops2g02801 680 Gene3D Phosphorylase Kinase; domain 1 294 394 - -
Rops2g02801 680 MobiDBLite consensus disorder prediction 1 18 - -
Rops2g02801 680 CDD STKc_IRAK 325 593 - -
Rops2g02801 680 Gene3D Transferase(Phosphotransferase) domain 1 395 603 - -
Rops2g02801 680 FunFam proline-rich receptor-like protein kinase PERK8 395 607 - -
Rops2g02801 680 PRINTS Proline rich extensin signature 34 55 - -
Rops2g02801 680 PRINTS Proline rich extensin signature 76 93 - -
Rops2g02801 680 PRINTS Proline rich extensin signature 56 72 - -
Rops2g02801 680 PRINTS Proline rich extensin signature 95 120 - -
Rops2g02801 680 MobiDBLite consensus disorder prediction 144 158 - -
Rops2g02801 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Rops2g02801 680 MobiDBLite consensus disorder prediction 28 50 - -
Rops2g02801 680 FunFam Proline-rich receptor-like protein kinase PERK8 294 394 - -
Rops2g02801 680 MobiDBLite consensus disorder prediction 658 680 - -
Rops2g02801 680 MobiDBLite consensus disorder prediction 51 143 - -
Rops2g02801 680 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Rops2g02801 680 ProSiteProfiles Protein kinase domain profile. 319 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02801 680 MobiDBLite consensus disorder prediction 173 187 - -
Rops2g02801 680 SMART serkin_6 319 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02801 680 MobiDBLite consensus disorder prediction 1 203 - -
Rops2g02801 680 SUPERFAMILY Protein kinase-like (PK-like) 299 592 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02801 Rops-Chr2 48677166 48683196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02801 203 646 Trihelix Transcription Factor Family AT1G70460 63.853 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Rops2g02801 PK_Tyr_Ser-Thr 4.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02801 - - gmx:100797563 764.222