Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02782 ATGGGAATGGCGCATCAAGGAGAACCAGCGAAGCTGCGGTGGGGTGAGCTTGATGAGGACGACGGTGAGGATCTGGATTTTCTTCTTCCACCTAGGCAGGTAATAGGGCCTGACGATAATGGAATAAAGAAGGTGATTGAATACAAGTTCGACGATGATGGCAACAAGGTCAAGATCACCACAACCACGCGCACTCGCAAACTCGCCAACGCGCGTCTTAGCAAACGCGCCGTCGAGCGCCGCTCATGGCCTAAGTTCGGCGACGCTGTACACGAGGATGTCGGTAGCCGCCTCACCATGGTCTCCACTGAAGAGATCCTTCTCGAACGCCCGAAGCCTCTTGGTGCCAAAACAGAGGAGCCAAAGACTTCTGGAGACCCATTGGCTCAGTTCCAAAAAGGGGCTGTTCTTATGGTTTGTAGGACTTGTGGGAAGAAGGGAGACCATTGGACTTCAAGGTGTCCATACAAGGATCTTGCACCGCCATCTGAGGGCTTTGTCGATAAGCCTGCGGCGACAGATGTGGCTGCTGCTGCCACTGGTTCCACCAAGGGAGCATATGTGCCTCCTGGTATGAGGGCAGGTGCGGAGAGGACTGGATCAGACATGAGGCGGAGGAACGATGAGAATTCTGTGCGGGTAACCAACCTCTCAGAGGACACAAGGGAGCCTGATTTGCTTGAATTGTTCCGTCCTTTTGGTCCTGTAAGCAGGGTGTATGTTGCTATTGATCAAAAGACTGGCATGAGTAGGGGTTTTGGCTTTGTTAACTTTGTCAGCAGGGAAGATGCACAAAGAGCCATCAACAAACTGAATGGCTATGGCTATGATAATCTCATTCTCAGAGTTGAATGGGCCACCCCAAGGACAAACTAA 876 0.5194 MGMAHQGEPAKLRWGELDEDDGEDLDFLLPPRQVIGPDDNGIKKVIEYKFDDDGNKVKITTTTRTRKLANARLSKRAVERRSWPKFGDAVHEDVGSRLTMVSTEEILLERPKPLGAKTEEPKTSGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFVDKPAATDVAAAATGSTKGAYVPPGMRAGAERTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGPVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRTN* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02782 291 MobiDBLite consensus disorder prediction 184 209 - -
Rops2g02782 291 CDD eIF3G 40 158 IPR024675 -
Rops2g02782 291 SUPERFAMILY RNA-binding domain, RBD 208 290 IPR035979 GO:0003676
Rops2g02782 291 Pfam Eukaryotic translation initiation factor 3 subunit G 33 159 IPR024675 -
Rops2g02782 291 SMART rrm1_1 211 284 IPR000504 GO:0003723
Rops2g02782 291 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 210 288 IPR000504 GO:0003723
Rops2g02782 291 Gene3D - 180 291 IPR012677 -
Rops2g02782 291 FunFam Eukaryotic translation initiation factor 3 subunit G 175 291 - -
Rops2g02782 291 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 21 287 - -
Rops2g02782 291 PIRSF Transl_init_eIF-3_RNA-bind 3 291 IPR017334 GO:0003743|GO:0005737|GO:0005852
Rops2g02782 291 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 212 278 IPR000504 GO:0003723
Rops2g02782 291 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 11 290 IPR017334 GO:0003743|GO:0005737|GO:0005852
Rops2g02782 291 CDD RRM_eIF3G_like 211 286 IPR034240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02782 Rops-Chr2 48151506 48153056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02782 1 289 Eukaryotic Initiation Factors Gene Family AT3G11400 67.913 3.07e-153 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02782 K03248 - gmx:100776807 544.658