Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02770 ATGACTGTGGATGAAGTGGGTAGTAGCTCTGAGTGGAGCAAAGAACAGGATAAAGCATTTGAAAATGCCTTGGCAATTCATCCTGAGGATGCTTCAGATCGATGGGAGAAGATTGCGGCTGATGTACCTGGGAAAACTTTAGAAGAGGTTAAACAGCACTACGAGCTCTTGGTTGATGATGTTAACCAGATTGAATCTGGTTGTGTGCCTCTACCATCTTATAATTCTTCTTCAGACGGCTCAACAAGCCATGGTGATGAAGGAGCTGGCAAGAAGGGAGGCCATCCTTGGAATTATAACAGTGAGTCTAACCATGGAACTAAGGCTTCGAAATCTGATCAGGAACGAAGAAAGGGTATTGCCTGGACAGAGGATGAACACAGGTTATTTCTTCTTGGCTTGGAAAAGTATGGAAAAGGTGACTGGCGAAGTATATCAAGGAACTTTGTGGTGACAAGAACACCTACACAAGTAGCAAGCCATGCCCAAAAATACTTCATTCGTTTGAACTCAATGAATAAAGATAGAAGGCGATCCAGCATACATGATATCACCAGTGTGAATAATGGAGAAATTTCAACACCTCAAGGACCAATTACTGGTCAAACAAATGATTCAGCAGCAAATTCTGCTGGAAAATCAGCCAAACAAGCCCCTCCAACCGCAACTGGGCCCCCAGGTGTAGGAATATATGCTGCTCCTACCATTGGGCAACCTATTGGAGGACCCCTCGTATCTGCAGTTGGCACCCCAGTGAACCTTCCTCCCCCTGCGCACATGGCATATGGTCTCGGAGCCCCTGTTCCTGGGGCAGTTGTTCCTGGCGCACCAATGAACTTGGGTCCTGTGCCATACCCTATGCCTCATACAGCTGCTCATAGGTGA 885 0.4655 MTVDEVGSSSEWSKEQDKAFENALAIHPEDASDRWEKIAADVPGKTLEEVKQHYELLVDDVNQIESGCVPLPSYNSSSDGSTSHGDEGAGKKGGHPWNYNSESNHGTKASKSDQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGEISTPQGPITGQTNDSAANSAGKSAKQAPPTATGPPGVGIYAAPTIGQPIGGPLVSAVGTPVNLPPPAHMAYGLGAPVPGAVVPGAPMNLGPVPYPMPHTAAHR* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02770 294 PANTHER TRANSCRIPTION FACTOR KUA1 8 289 - -
Rops2g02770 294 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Rops2g02770 294 CDD SANT 121 166 IPR001005 -
Rops2g02770 294 ProSiteProfiles Myb-like domain profile. 114 166 IPR001005 -
Rops2g02770 294 MobiDBLite consensus disorder prediction 68 118 - -
Rops2g02770 294 MobiDBLite consensus disorder prediction 10 34 - -
Rops2g02770 294 CDD SANT 11 58 IPR001005 -
Rops2g02770 294 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Rops2g02770 294 MobiDBLite consensus disorder prediction 1 34 - -
Rops2g02770 294 MobiDBLite consensus disorder prediction 187 217 - -
Rops2g02770 294 SUPERFAMILY Homeodomain-like 116 171 IPR009057 -
Rops2g02770 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 113 170 IPR017930 -
Rops2g02770 294 MobiDBLite consensus disorder prediction 187 225 - -
Rops2g02770 294 FunFam transcription factor MYB1R1 120 171 - -
Rops2g02770 294 Gene3D - 120 172 - -
Rops2g02770 294 Gene3D - 4 71 - -
Rops2g02770 294 ProSiteProfiles SANT domain profile. 122 170 IPR017884 -
Rops2g02770 294 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Rops2g02770 294 MobiDBLite consensus disorder prediction 68 84 - -
Rops2g02770 294 FunFam Transcription factor SRM1 4 71 - -
Rops2g02770 294 NCBIfam myb-like DNA-binding domain, SHAQKYF class 118 168 IPR006447 GO:0003677
Rops2g02770 294 Pfam Myb-like DNA-binding domain 121 166 IPR001005 -
Rops2g02770 294 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Rops2g02770 294 SMART sant 118 168 IPR001005 -
Rops2g02770 294 SMART sant 8 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02770 Rops-Chr2 47942955 47955042 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Rops2g02770 Myb_DNA-binding 2.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02770 - - gmx:100820272 522.702