Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02748 ATGAAATGGTTGTGCGTTGTGGTTTTGGGAGTGCATGGCTTTAGCATATTCTTAATGTGCTGCTCAAGTACATTGATATCTTTGCCAGATGGGTCTTTAGCTCTCACACCTCTTCGAAAGGTCATGATGTTGAAACACACTCAAGCCGCCACCGCCGTCCGCCTTCGACGCCCTTATGTCTGGCGCTCGCGTCGCCGCCAACAACAAGAAGAACAAATCGCCGCCTACTTCCTCATCTCCAAAGAAAAGAAAATCCCATCACACCGACCCCCCGCACAAAACCCTAACAACGTCAAAACCCCTGAAACCGTTACAACCGTCCAACCGCCTAACAAACCCCAAGAAACCGTAAAGTCTGAACCGCCAAAGAAGATTCCCAACACTTCCATAACTGCTGAACTGAAGGAACTGGTTCCACAACTGAAGAAGAAGCCCTCTGATTTCGATCCCAATTCTGTTACATGCTGGGAGAAGAACAAACCCGTGCCGTTTCTTTTCCTCTGTTTGGCCTTTGATATGATCGCTGATGAGACTGGGAGGATCGTGATCACTGACATTGTGTGCAACATGTTGAGGATTGTGATTCACGCCATGCTGGGGGATCTTGTGCCGGTGGTTTATCTCTCCGCGAACAGGATTGCTCCGGCGCATGAAGGTTTGGAATTGGGAATCGGCGACGCTTCGATGATCAAGGCGCTTGCTGAGGCGTGTGGAAGGACTGAGTTGCAGATTAAGAATCAGTATAAGGAGAAAGGTGACTCGGGGTTAGTTGCTAAAGCGAGTCATTCTTCTCAGTCTATGATGAGGAAGCCTGATGCTTTGACCATTAGGAAGGTTTTCAACACCTTTCGCCTTATTGCCAAGACAAAGTTGCGAATTGGATATGCTGAGCAAACTCTCTTAGCTGCATTAGGTCAAGCTGCAGTATACACTGAAGAACATTCTAAACTGCCTCCTGAAATTAAGTCTCCTTTAGAAGAGGCTTCGAAGATTGTAAAACAAGTATATTCTGTTCTTCCTGACTATGACAATATAGTGTCTGCACTGCTTACGGGTGGTGTATGGATACTTCCAAAGTCATGTAATTTTACTCCTGGGGTTCCAGTTGGGCCTATGCAGTCAAAAGCAACAAAGGGTGTATCTGAAGTTCTGAATAAATTCCAGGATGTAGAGGTTACCAGCGAATACAAATACGATGGAAAGTGTGCTCAGGTGATACTTCATGTTCAAATTTTCCAGCAGAAATATACTGCTCATGATAATTATTATGTACAATAA 1278 0.4546 MKWLCVVVLGVHGFSIFLMCCSSTLISLPDGSLALTPLRKVMMLKHTQAATAVRLRRPYVWRSRRRQQQEEQIAAYFLISKEKKIPSHRPPAQNPNNVKTPETVTTVQPPNKPQETVKSEPPKKIPNTSITAELKELVPQLKKKPSDFDPNSVTCWEKNKPVPFLFLCLAFDMIADETGRIVITDIVCNMLRIVIHAMLGDLVPVVYLSANRIAPAHEGLELGIGDASMIKALAEACGRTELQIKNQYKEKGDSGLVAKASHSSQSMMRKPDALTIRKVFNTFRLIAKTKLRIGYAEQTLLAALGQAAVYTEEHSKLPPEIKSPLEEASKIVKQVYSVLPDYDNIVSALLTGGVWILPKSCNFTPGVPVGPMQSKATKGVSEVLNKFQDVEVTSEYKYDGKCAQVILHVQIFQQKYTAHDNYYVQ* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02748 425 MobiDBLite consensus disorder prediction 90 114 - -
Rops2g02748 425 MobiDBLite consensus disorder prediction 86 126 - -
Rops2g02748 425 Pfam DNA ligase N terminus 163 294 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Rops2g02748 425 Gene3D - 288 372 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Rops2g02748 425 Gene3D - 139 287 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Rops2g02748 425 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 145 361 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Rops2g02748 425 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 80 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02748 Rops-Chr2 46699669 46710015 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02748 123 405 Core DNA Replication Machinery Family AT1G08130 58.991 2.34e-121 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02748 K10747 - gmx:100783155 436.032