Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02747 ATGAAAATTGGAGCTGCTGCCAGTCACAACACTCTAGACTTTGTTAACAATATTTGGTGGAGCTATCATCTCTTGCAGGATATTAGGTCCAGTAGTCAGCGGGAAGTCATCGCCTATCATCTCATCCAGCAGCTCACATACAATGACAAGTTTGCAACATCAATAACATCAAATGATGTTGAGGAAATACAGAAATTTCTTGACGAAGCTGTTAATGCAAGTATAGGGGACTCACTAGATTTGGTACCTATTGGTGCTTTGCACGGTTGGGGGAAACGTACAGGAACTGGATTCTCTGATAAAATGCTCGAAGAATGTTCTGCTAGCCTTGGCTCTAAAGTGATTCCCATGCCGAAGGATCTCATTGCATCTTTCCCTCTCACCCAGCAGCTCATCACCTCCACGCAATGCCTCCGTCCCAGCCACGCCGGTGACGTGTCCCCGCAGCCAGCTCCTCCATCACAACCACGTCCATTGAAGATGCAGTCGAAGATCAACACTTTCTTCAAATCTCCCTCTGCTACCTCTCCCCAATCCCTCCTCGACGATGATTTATCCATCTGGGAGAACAAACGTCACTGTATCTTCAACACTTACCACCGAACCCGTCCTAACCCTAACATGCCTGGTTCCTCTTCCAAACTGGAACAAAACCTAACCGGTAAAACGGTCGTGAAGAACAAGAAGAGAAGCTATGCTCAATTCCACCTTGATTTCGGCCAATCCGATTTCCTCTTACGCTCATGTTCCACTTGTGGAGTCAAGTTCACTCTCGGTGATGCAGAAGATGAGAAATCACACAAGGAATTTCATAAACGTTACACACAAGGGATCCAATTCAGAGGTTGGACAATTGAAAGGGTTATCCCTGTGCCCAGTGTCAAACAGGGTCGAATCATTTGGGTGTTGGAGACGGATCCATCTGCTCATAGAAACAAGGTTGAAGAAGTTGTGAAAATGATGGAAATTGAGTTAGGAAGTGGATGGATAGTCCATGAACACTGTAAGAGGATTGTTGGGTGCCTGGTTGCAGAACGAATCGAAGAAGCATTCAAAGTTGTGTCTTGCTCGATTGCTGGGCATCATTCTGATAGTGTAAGGAAAAAGGAAACACGGTCATGTTCAACCACTCTTCGGTTTGGAAATATTATTTTTCAAAGGGAAGTTGAAAAAAGAGCTGTGACAATGAGTGATTCTGAGGTGATGGAAAGATCGGTTGGTGGGGCAATCTTTTGTGAAAGCAAACCTATTGTTGCTGTTTGTGGCATTAGAGCCATTTGGGTCACCCCCTCCAACAGAAGAAAACACATAGCTAGCCAATTGTTAGATGCTGTTAGGAAAAGTTTCTGCACAGGCCTTGAGCTTGAACGTGCTCAGCTAGTATTCGCTCAGCCAACCTCAGTTGGAAAGGCATTAGCATCTAGTTACACTGGCACTGGATCATTCTTGGTTTATAAAACCAACAAAACAGAGGTGTAG 1479 0.4496 MKIGAAASHNTLDFVNNIWWSYHLLQDIRSSSQREVIAYHLIQQLTYNDKFATSITSNDVEEIQKFLDEAVNASIGDSLDLVPIGALHGWGKRTGTGFSDKMLEECSASLGSKVIPMPKDLIASFPLTQQLITSTQCLRPSHAGDVSPQPAPPSQPRPLKMQSKINTFFKSPSATSPQSLLDDDLSIWENKRHCIFNTYHRTRPNPNMPGSSSKLEQNLTGKTVVKNKKRSYAQFHLDFGQSDFLLRSCSTCGVKFTLGDAEDEKSHKEFHKRYTQGIQFRGWTIERVIPVPSVKQGRIIWVLETDPSAHRNKVEEVVKMMEIELGSGWIVHEHCKRIVGCLVAERIEEAFKVVSCSIAGHHSDSVRKKETRSCSTTLRFGNIIFQREVEKRAVTMSDSEVMERSVGGAIFCESKPIVAVCGIRAIWVTPSNRRKHIASQLLDAVRKSFCTGLELERAQLVFAQPTSVGKALASSYTGTGSFLVYKTNKTEV* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02747 492 MobiDBLite consensus disorder prediction 138 160 - -
Rops2g02747 492 CDD NAT_SF 406 456 - -
Rops2g02747 492 Pfam zinc-finger of acetyl-transferase ESCO 234 273 IPR028005 -
Rops2g02747 492 PANTHER N-ACETYLTRANSFERASE ECO 175 488 - -
Rops2g02747 492 Pfam ESCO1/2 acetyl-transferase 419 485 IPR028009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02747 Rops-Chr2 46646856 46656071 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02747 50 119 Core DNA Replication Machinery Family AT1G08130 38.281 1.32e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02747 K11268 - gmx:100811441 405.601