Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02737 ATGACTGTTCCTGGAATTATTTCTGACCTGGGTGGTTATGGTTGTAATGATGGGGATTCAGATGTTAGCTCTTCTGGATGTCGGGAGCGGAAAATCATTGTGGCAAACATGCTCCCATTGCAGGCTAAAAGAGATATAGAAACTGCTAAATGGTGCTTCAGTTGGGATGAAGATTCAATTTTATTACAATTAAAAGATGGGTTTTCTTCTGATACTGAGGTAAGCTATGTGGGTTCCCTGAAGGTTGAAATAGATGCCAGTGAGCAGGAAGAAGTTGCTCAGAGATTACTGGATGACTTTAATTGTGTACCTACCTTTCTACCCCATGATCTGCAGAAAAAGTTCTATCTTGGCTTTTGTAAGCAGCAGCTTTGGCCTCTCTTTCATTATATGCTACCCATATGCTCAGATCATGGTGATCGCTTTGATCGCATGCTTTGGCTGGCTTACGTTTCTGCAAACAAAATATTTGCCGACAAGGTTATGGAAGTAATTAATCCTGATGAAGATTTTGTTTGGGTTCATGACTATCACCTGATGGTTTTGCCTACTTTTTTGAGGAAACGATATAATCGAGTTAAACTTGGGTTCTTTCTTCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACTTTGCCAGTAAGGGATGAAATACTGAAGGGATTGTTAAATTCTGATTTAATTGGTTTTCATACATTTGACTATGCTCGCCACTTTCTTTCTTGCTGCAGTAGAATGCTAGGTCTGGACTATGAATCTAAGCGAGGACATATAGGACTTGATTACTTTGGCCGCACTATATTTATTAAAATTTTGCCTGTAGGCATTCACATGGGTAGGCTTGAATCTGTATTAAGTCTTCCTTCTACATCTGCTAAACTAAAAGAGGTCCAGGAAGAGTTTAAGGGTAAGAAGGTAATTCTTGGTGTTGACGACATGGATATTTTCAAAGGCATCAGTCTGAAACTTCTAGCTGTGGAGCAGCTGCTGCAGCAGCATCCAGATTTGCAGGGCAAAGTTGTCCTAGTTCAAATTGTAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGATGGAAACATATTTAATTGCTCAGAGGATCAATGATATATATGGTTCAAATCATTATCAGCCCGTCATTCTCATTGACCGCCCTGTTCCTCGTTTTGAAAAGAGTGCCTATTATGCTGTCGCTGAATGTTGCATTGTCAATGCTATAAGGGATGGGATGAACTTAGTCCCATACAAATATATTGTCTGCAGACAGGGAACAGCACAACTGGATGAAGCATTGGGTAGAAAAAGTGATTCTCCTCGTACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCACCTTCTCTGAGTGGGGCCATCAGGGTCAATCCCTGGGATATAGATGCAGTTGCTGATGCTCTGAATTTGGCCATTACCATGAATGATTCAGAGAAACAGTTGCGCCATGAGAAACACTATCGGTATGTCAGTTCTCATGATGTGGCATATTGGGCATGCAGCTTCATGCAGGATTTGGAGAGAGCCTGCAAAGAACATTTCACCAAAAGGTGCTGGGGAATTGGTTTGGGCCTAGGGTTTAGAGTTGTTTCTCTTCCTCATGGTTTTAGGAAGTTGTCCATTGACCATATTGTTTCAGCATACAAAAGAACCAGTAGAAGGGCCATATTTCTTGATTATGATGGTACTGTTGTGCCACAATCTTCTATAAATAAAACTCCCAGCCCTGAAGTCATATCTGTGCTAAATGCTCTATGTAATGATACCAAGAATATTGTGTTCATTGTTAGTGGGAGGGGAAGAGATTCTCTGAGTGATTGGTTCACTTCATGCAAAATGCTGGGACTTGCAGCTGAACATGGGTACTTTTTAAGGTGGAATAGAGATTCTGAATGGGAAACCAGTCACTTGTCCGCGGACCTTGATTGGAAAAAGGTAGTGGAACCTGTCATGCAGTTGTACACAGAAACAACTGATGGATCTAGTATTGAAATTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAATCCAAAGAATTGTTGGATCACTTGGAAAGCGTTCTTGCTAATGAACCAGCAATTGTTAATAGAGGCCAGCATATTGTTGAAGTTAAGCCACAGGGAGTAAGCAAGGGTTTGGTAGCTGAAAAGGTTCTTTCAACAATGGTTAGTGGCGGTAATCCACCAGATTTTGTAATGTGCGTTGGAGATGACAGGTCTGATGAAGACATGTTTGAGAGCATCTTGAGGACAGTCTCATGCCCATCATTACCATCGGCTCCAGAAATCTTTGCCTGCACTGTAGGTAGGAAGCCTAGCAAGGCCAAGTATTTTCTTGATGATGCTGCTGATGTTGTAAAGATGCTTCAGGGCCTTGCTGCTTCATCTAATCCAAAGCCCAGGCATCTTGCTCAGTTCCAGGTTTCTTTTGAGAGCACAGTTTGA 2496 0.4175 MTVPGIISDLGGYGCNDGDSDVSSSGCRERKIIVANMLPLQAKRDIETAKWCFSWDEDSILLQLKDGFSSDTEVSYVGSLKVEIDASEQEEVAQRLLDDFNCVPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPICSDHGDRFDRMLWLAYVSANKIFADKVMEVINPDEDFVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLESVLSLPSTSAKLKEVQEEFKGKKVILGVDDMDIFKGISLKLLAVEQLLQQHPDLQGKVVLVQIVNPARGSGKDVQEAKMETYLIAQRINDIYGSNHYQPVILIDRPVPRFEKSAYYAVAECCIVNAIRDGMNLVPYKYIVCRQGTAQLDEALGRKSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALNLAITMNDSEKQLRHEKHYRYVSSHDVAYWACSFMQDLERACKEHFTKRCWGIGLGLGFRVVSLPHGFRKLSIDHIVSAYKRTSRRAIFLDYDGTVVPQSSINKTPSPEVISVLNALCNDTKNIVFIVSGRGRDSLSDWFTSCKMLGLAAEHGYFLRWNRDSEWETSHLSADLDWKKVVEPVMQLYTETTDGSSIEIKESALVWHHQDADPDFGSCQSKELLDHLESVLANEPAIVNRGQHIVEVKPQGVSKGLVAEKVLSTMVSGGNPPDFVMCVGDDRSDEDMFESILRTVSCPSLPSAPEIFACTVGRKPSKAKYFLDDAADVVKMLQGLAASSNPKPRHLAQFQVSFESTV* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02737 831 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 30 519 - -
Rops2g02737 831 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 2 810 IPR001830 GO:0003824|GO:0005992
Rops2g02737 831 CDD HAD_TPP 563 804 - -
Rops2g02737 831 FunFam Trehalose-6-phosphate synthase 2 645 724 - -
Rops2g02737 831 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 691 822 - -
Rops2g02737 831 FunFam Alpha,alpha-trehalose-phosphate synthase 284 499 - -
Rops2g02737 831 NCBIfam HAD-IIB family hydrolase 563 764 IPR006379 -
Rops2g02737 831 Gene3D Glycogen Phosphorylase B; 24 282 - -
Rops2g02737 831 NCBIfam trehalose-phosphatase 560 809 IPR003337 GO:0003824|GO:0005992
Rops2g02737 831 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 561 678 - -
Rops2g02737 831 Pfam Trehalose-phosphatase 565 798 IPR003337 GO:0003824|GO:0005992
Rops2g02737 831 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 23 282 - -
Rops2g02737 831 Gene3D Glycogen Phosphorylase B; 283 499 - -
Rops2g02737 831 CDD GT20_TPS 30 515 IPR001830 GO:0003824|GO:0005992
Rops2g02737 831 Gene3D - 561 679 IPR023214 -
Rops2g02737 831 Gene3D - 692 822 IPR023214 -
Rops2g02737 831 Pfam Glycosyltransferase family 20 30 515 IPR001830 GO:0003824|GO:0005992
Rops2g02737 831 SUPERFAMILY HAD-like 562 810 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02737 Rops-Chr2 46329729 46335030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02737 1 831 Trehalose Biosynthesis Gene Families AT1G23870 75.656 0.0 1335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02737 K16055 - gmx:100775779 1573.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g02737 2 46329729 46335030 Rops10g00634 10 15602603 15608991 ECH
Rops2g02737 2 46329729 46335030 Rops2g02737 2 46329729 46335030 ECH
Rops1g00872 1 21116855 21122248 Rops2g02737 2 46329729 46335030 PCT