Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02726 ATGGTTGATAACATAGTGTTATTTTGTCTGTTCTTTTTATTCTCCTACATAAGAACATGTACTTCACTAGATAGTTTAGCTGTGAATGAATCTATCCAAGATGGCCAGACTTTGGTTTCAGCAAATGGAACTTTTGAAGTTGGTTTCTTCAGCCCTGGAAGATCAACAAACAGATATTTGGGTATTTGGTACAGGAATTTATCCCCTTTCACTGTTGTGTGGGTGGCCAACAGGGAAACACCACTTCAGAATAAGTCTGGAGTCTTAAAGCTCAATGAAAAAGGGGTTCTTGAGATTCTCAATGGCACAAACAGCTCTATTTGGTCATCATCAAACAAAGCAATGAAAAATTCAATAATTGCACAGGTCTTGGACACTGGAAATCTTGTGTTGACAAATGGAGACAATCTTTTGTGGCAGAGTTTTGATTTTCCATGTCAAACAGTATTGCCAGGAATGAAGCATGGATGGAATCTAGTAACTGGTCTAGACAGGTTTATCTCATCTTGGAAGAGTGCAGATGATCCAGCTAAGGGGGACTATTCTGTGAATATTGACATTAGAGGATATCCACAATTAGTTTTCATGAAGGGATCTAATATAAAATCTAGAATGGGTTCATGGAATGGCATTGGTTTTACTGGAAATCCAATTCAACAATTGAGACAGAAGCAAAGATATAAATTTGTCATGAATTCAAAAGAAGTGTATCATCAGTATGAAGTGGTTGATAGCTCCCTTGTCTCCATATATACACTGACCCCTTCTGGAATTTTTCAGGGTTTAGCTTGGACAAGTCAAACAAGTGGTAGGATAGTTATAAACACTGGGGGACAAGACTCCTGTGATAATTATGCCATGTGTGGTGCAAATTCTATATGCAATATGGATGGTAATGTTCCCAAATGTGAATGTCTGAAAGGTTATGTTCCTAAATTTCCTCGACAATGGGATATATCTTATTGGTCTAACGGTTGTGTTCTGAGGAATGAATCTGATTGTACAAACATTAACACAGATGGATTCTGGAGGTACACTGATATGAAATTGCCAGACACTTCTTCATCATGGTATAATAAGACCATGAATCTTGAGGAATGTCAGAAATCATGTCTAAGAAACTGTTCATGTACAGCATGTGCAAATTTGGATATCAGTAATGGAGGAAGTGGCTGTTTGCTTTGGTTTGATGATCTTGTTGACATGAGGAAATTCTCTCAATGGGGACAAGACCTTTATGTCAGAGTCCCTGCTTCAGAACTAGTTAATGGCCACGGAAACAAGAAGAAGAAGTTGACAGGAATCATGGTTGGACTGATTATTTTTGGATTCGTTACATGTATCTCTATAATAATTCGTCGAAAGCAAGTAAGGGCAAGAGTATATCATCTTGAATCATTTCAGTGGCGACAAGAATATTTTCAATTGAGGAAGGAAAACATGGATCTACCAATATTTGATTTGTCAATCATTGCTAAAGCTACTAATGATTTTTCTAGTAGCAATAAACTTGGGGAAGGTGGATTTGGACCAGTGTATAAGGGTACACTGATAGATGGGAAAGAAGTAGCCATCAAACGACACTCAAATATGTCTGATCAAGGATTGGAGGAGTTTAAAAATGAAGTGATGTTGATTGCAAAACTTCAACACCGTAATCTTGTGAAGCTTCTTGGTTGCTGCATTCAAGGAGAGGAAAAAATGTTGATATATGAATACATGCCCAACAAGAGCTTAGATTACTCCATCTTTGATGAAACCAAAAGCAAACTCTTGGCCTGGCCTCAACGTTTGCACATTATTGGTGGCATTGCTCGAGGGCTTCTCTATCTTCATCAAGACTCTAGACTCAGAATTATTCACAGAGATTTGAAAACTAGCAATATCCTACTAGATGCCCATATGAATCCAAAAATCTCAGACTTTGGCTTGGCTCGGACTTTCAGGGGAGATCAAGTTGGAGCCAAAACAAAAAAAATGGTTGGAACATATGGTTACATGCCTCCAGAGTATGTTGTGCATGGTCATTACTCTGTGAAATCAGATGTCTTTAGTTTTGGTGTATTAGTACTAGAGATAGTCAGTGGGAAGAAGAATAAGGGATTTTCTGACCCAGAACACTCCCTTAATCTTCTTGGACATGCATGGAGACTTTGGACTGAAGACAAGCCACTGGAACTGGTAGATGAATGCTTACTTGAAACATGCATTTCTTTTGAAGTCTTACGTTGCATACATGTGGGTTTGTTGTGTGTACAACAAAAACCAGAAGACAGACCAGACATGTCTCTTGTCACTCTTATGTTGAATGGTGAGAAATTATTGCCTCAGCCCAAGGCTCCTGGATTTTATACTGGAAGTGGTTTACCTGAATCAGTATCCCCATCATCAAATGATATGTCCATTACAATATTTGAGGCAAGATAG 2427 0.3832 MVDNIVLFCLFFLFSYIRTCTSLDSLAVNESIQDGQTLVSANGTFEVGFFSPGRSTNRYLGIWYRNLSPFTVVWVANRETPLQNKSGVLKLNEKGVLEILNGTNSSIWSSSNKAMKNSIIAQVLDTGNLVLTNGDNLLWQSFDFPCQTVLPGMKHGWNLVTGLDRFISSWKSADDPAKGDYSVNIDIRGYPQLVFMKGSNIKSRMGSWNGIGFTGNPIQQLRQKQRYKFVMNSKEVYHQYEVVDSSLVSIYTLTPSGIFQGLAWTSQTSGRIVINTGGQDSCDNYAMCGANSICNMDGNVPKCECLKGYVPKFPRQWDISYWSNGCVLRNESDCTNINTDGFWRYTDMKLPDTSSSWYNKTMNLEECQKSCLRNCSCTACANLDISNGGSGCLLWFDDLVDMRKFSQWGQDLYVRVPASELVNGHGNKKKKLTGIMVGLIIFGFVTCISIIIRRKQVRARVYHLESFQWRQEYFQLRKENMDLPIFDLSIIAKATNDFSSSNKLGEGGFGPVYKGTLIDGKEVAIKRHSNMSDQGLEEFKNEVMLIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDYSIFDETKSKLLAWPQRLHIIGGIARGLLYLHQDSRLRIIHRDLKTSNILLDAHMNPKISDFGLARTFRGDQVGAKTKKMVGTYGYMPPEYVVHGHYSVKSDVFSFGVLVLEIVSGKKNKGFSDPEHSLNLLGHAWRLWTEDKPLELVDECLLETCISFEVLRCIHVGLLCVQQKPEDRPDMSLVTLMLNGEKLLPQPKAPGFYTGSGLPESVSPSSNDMSITIFEAR* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02726 808 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 759 - -
Rops2g02726 808 MobiDBLite consensus disorder prediction 789 808 - -
Rops2g02726 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 142 - -
Rops2g02726 808 Pfam D-mannose binding lectin 71 171 IPR001480 -
Rops2g02726 808 PIRSF SRK 1 808 IPR024171 GO:0004674
Rops2g02726 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Rops2g02726 808 CDD B_lectin 29 145 IPR001480 -
Rops2g02726 808 Pfam PAN-like domain 337 402 IPR003609 -
Rops2g02726 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 333 416 - -
Rops2g02726 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 777 - -
Rops2g02726 808 Gene3D Phosphorylase Kinase; domain 1 472 573 - -
Rops2g02726 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 176 IPR036426 -
Rops2g02726 808 Gene3D Hepatocyte Growth Factor 333 413 - -
Rops2g02726 808 Pfam Protein tyrosine and serine/threonine kinase 501 722 IPR001245 GO:0004672|GO:0006468
Rops2g02726 808 Gene3D - 18 142 IPR036426 -
Rops2g02726 808 CDD PAN_AP_plant 332 417 - -
Rops2g02726 808 ProSiteProfiles Protein kinase domain profile. 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02726 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 463 573 - -
Rops2g02726 808 SMART serkin_6 498 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02726 808 SMART ntp_6 337 416 IPR003609 -
Rops2g02726 808 ProSiteProfiles PAN/Apple domain profile. 334 417 IPR003609 -
Rops2g02726 808 SMART blect_4 29 145 IPR001480 -
Rops2g02726 808 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Rops2g02726 808 MobiDBLite consensus disorder prediction 786 808 - -
Rops2g02726 808 SUPERFAMILY Protein kinase-like (PK-like) 480 769 IPR011009 -
Rops2g02726 808 CDD STKc_IRAK 504 771 - -
Rops2g02726 808 Pfam S-locus glycoprotein domain 204 313 IPR000858 GO:0048544
Rops2g02726 808 Gene3D Transferase(Phosphotransferase) domain 1 574 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02726 Rops-Chr2 46127242 46131100 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02726 486 784 Receptor kinase-like Gene Family AT4G23140 61.111 1.75e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g02726 PK_Tyr_Ser-Thr 5.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02726 - - aprc:113865090 1233.39