Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02725 ATGAGAACATGTACTTCACTAGATAGTTTAGCTGTGAATGAATCTATCCAAGATGGCCAGACTTTGGTTTCAGCAAATGGAACTTTTGAAGTTGGTTTCTTCAGCCCTGGAAGATCAACAAACAGATATTTGGGTATTTGGTATAAGAATTTATCCCCTTTCACTGTTGTGTGGGTGGCCAACAGGGAAACACCACTTCAGAATAAGTCAGGAGTCTTAAAGCTCAATGAAAAAGGGGTTCTTGAGATTCTCAATGGCACAAACAGCTCTATTTGGTCATCATCAAACAAAGCAATGAAAAATCCAATAATTGCACAGGTCTTGGACACTGGAAATCTTGTATTGAGAAATGGAGACAATCTTTTGTGGCAGAGTTTTGATTTTCCATGTCAAACATATTTGCCAGGAATGAAGCATGGATGGAATCTAGTAACTGGTCTAGACAGGTTTATGTCATCTTGGAAGAGTGCAGATGATCCAGCTAAGGGGAACTATTCTGTGAATATTGACATTAGAGGATATCCACAATTAGTTTTCATGAAGGGATCTAATATAAAATCTAGAATGGGTTCATGGAATGGCATTGGTTTTACTGGAAATCCAATTCAACAATTGAGACAGAAGCAAAGATATAAATATGTCATGAATTCAAAAGAAGTGTATCATCAGTATGAAGTGGTTGATAGCTCCCTTGTCTCCATATATACACTGACCCCTTCTGGAATTTTTCAGGGTTTAGCTTGGACAAGTCAAACAAGTGGTAGGATAGTTATAAACACTGGGGCACAAGACTCCTGTGATAATTATGCCATGTGTGGTGCAAATTCTATCTGCAATATGGATGGTAATGTTCCAAAATGTGAATGTCTGAAAGGTTATGTTCCTAAATTTCCTCAACAATGGGATATATCATATTGGTCTAACGGTTGTGTTCTGAGGAATGAATCTAATTGTACAAACATTCACACAGATGGGTTCTGGAGGTACACTGATATGAAATTGCCAGACACTTCTTCATCATGGTATAATAAGACCATGAATCTTGAGGAATGTCAGAAATCATGTCTAAGAAACTGTTCATGTACAGCATGTGCAAATTTGGATATCAGTAATGGAGGAAGTGGCTGTTTGCTTTGGTTTGATGATCTTGTTGACATGAGGAAATTCTCTCAATGGGGACAAGACCTTTATGTCAGAGTCCCTGCTTCAGAACTAGTTAATGGCCACGGAAACAAGAAGAAGTTGACAGGAATCATGGTTGGACTGATTATTTTTGGATTCGTTACATGTATCTCTATAATAATACGTCGAAAGCAAGTGAGGGCAAGAGTATATCATCTTGAATCATTTCAGTGGCGACAAGAATATTTTCAATTGAGAAAGGAAGACATGGATCTACCAATATTTGATTTGTCAATCATTGCTAAAGCTACTAATGATTTTTCTAGTAGCAATAAACTTGGGGAAGGTGGATTTGGACCAGTGTATAAGGGTACACTGATAGATGGGAAAGAAGTAGCCATCAAACGACACTCAAATATGTCTGATCAAGGATTTGAGGAGTTTAAAAATGAAGTAATGTTGATTGCAAAACTTCAACACCGTAATCTTGTGAAGCTTCTTGGTTGCTGCATTCAAGGAGAGGAAAAAATGTTGATATATGAATACATGCCCAACAAGAGCTTAGATTACTTCATCTTTGATGAAACCAAAAGCAAACTCTTGGCCTGGCCTCAGCGTTTGCACATTATTGGTGGCATTGCTCGAGGGCTTCTTTATCTTCATCAAGACTCAAGACTCAGAATTATTCACAGAGATTTGAAAACTAGCAATATCCTACTAGAAGCCCATATGAATCCAAAAATCTCAGACTTTGGCTAG 1881 0.3775 MRTCTSLDSLAVNESIQDGQTLVSANGTFEVGFFSPGRSTNRYLGIWYKNLSPFTVVWVANRETPLQNKSGVLKLNEKGVLEILNGTNSSIWSSSNKAMKNPIIAQVLDTGNLVLRNGDNLLWQSFDFPCQTYLPGMKHGWNLVTGLDRFMSSWKSADDPAKGNYSVNIDIRGYPQLVFMKGSNIKSRMGSWNGIGFTGNPIQQLRQKQRYKYVMNSKEVYHQYEVVDSSLVSIYTLTPSGIFQGLAWTSQTSGRIVINTGAQDSCDNYAMCGANSICNMDGNVPKCECLKGYVPKFPQQWDISYWSNGCVLRNESNCTNIHTDGFWRYTDMKLPDTSSSWYNKTMNLEECQKSCLRNCSCTACANLDISNGGSGCLLWFDDLVDMRKFSQWGQDLYVRVPASELVNGHGNKKKLTGIMVGLIIFGFVTCISIIIRRKQVRARVYHLESFQWRQEYFQLRKEDMDLPIFDLSIIAKATNDFSSSNKLGEGGFGPVYKGTLIDGKEVAIKRHSNMSDQGFEEFKNEVMLIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDYFIFDETKSKLLAWPQRLHIIGGIARGLLYLHQDSRLRIIHRDLKTSNILLEAHMNPKISDFG* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02725 626 Gene3D Hepatocyte Growth Factor 316 397 - -
Rops2g02725 626 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 626 - -
Rops2g02725 626 CDD B_lectin 13 129 IPR001480 -
Rops2g02725 626 Gene3D Phosphorylase Kinase; domain 1 455 556 - -
Rops2g02725 626 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 317 400 - -
Rops2g02725 626 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 446 556 - -
Rops2g02725 626 Pfam D-mannose binding lectin 55 155 IPR001480 -
Rops2g02725 626 Gene3D Transferase(Phosphotransferase) domain 1 557 626 - -
Rops2g02725 626 Pfam Protein tyrosine and serine/threonine kinase 484 626 IPR001245 GO:0004672|GO:0006468
Rops2g02725 626 Pfam PAN-like domain 321 386 IPR003609 -
Rops2g02725 626 ProSiteProfiles PAN/Apple domain profile. 318 401 IPR003609 -
Rops2g02725 626 FunFam Os07g0541700 protein 557 626 - -
Rops2g02725 626 SMART blect_4 13 129 IPR001480 -
Rops2g02725 626 ProSiteProfiles EGF-like domain profile. 262 299 IPR000742 -
Rops2g02725 626 SUPERFAMILY Protein kinase-like (PK-like) 464 626 IPR011009 -
Rops2g02725 626 CDD PAN_AP_plant 316 401 - -
Rops2g02725 626 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 160 IPR036426 -
Rops2g02725 626 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 2 126 - -
Rops2g02725 626 SMART serkin_6 481 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02725 626 Gene3D - 4 126 IPR036426 -
Rops2g02725 626 ProSiteProfiles Protein kinase domain profile. 481 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02725 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Rops2g02725 626 ProSiteProfiles Bulb-type lectin domain profile. 7 128 IPR001480 -
Rops2g02725 626 Pfam S-locus glycoprotein domain 188 297 IPR000858 GO:0048544
Rops2g02725 626 SMART ntp_6 321 400 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02725 Rops-Chr2 46094920 46098096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02725 417 626 Receptor kinase-like Gene Family AT4G04570 53.738 3.38e-68 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g02725 PK_Tyr_Ser-Thr 3.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02725 - - aprc:113865090 975.311