Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02722 ATGGCTTCTTCTTTGAGAATCTCAAGGCTCATCTCACGCTCTTTTTCTTCAGCTTCTTCTACCCCCTTGTTCTCTAGAGGTGGAAATGGTTACCTGGGTACAAGACTTTGTAAATACAGCACTGCTACTGCTGTTGAAGAACCCATTAAACCAGCAGTTCAAGTAGATCACACCCAGCTTTTGATTGATGGGAAATTCGTAGATGCTGCTTCTGGTAAAACTTTTCCAACGTTGGATCCTAGGACAGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATCGAGCAGTTGCAGCTGCACGCAAAGCATTTGATCAAGGGCCATGGCCTAAGATGACTGCCTATGAAAGGCAAAGGATAATGTTACGTGCTGCTGATCTGCTTGAAAAGCATAATGATGAGCTTGCAGCACTGGAGACTTGGGATAATGGGAAGCCATATGAACAATCTGCTCAGATTGAAATTCCAATGTTGGTTCGCCTAATTCGTTACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACTGTTCCAGCTGATGGGCCATATCATGTGCAAACATTGCATGAACCCATTGGTGTTGCTGGTCAGATCATTCCATGGAACTTCCCTCTTGTCATGTTTGGTTGGAAGGTGGGACCAGCATTGGCCTGTGGCAACACTATTGTTCTGAAAACAGCTGAGCAGACACCATTATCTGCTATATATGCAGCAAAGCTATTTCATGAGGCTGGACTTCCTGCTGGTGTTTTGAATATAGTATCAGGCTTTGGTCCAACTGCTGGTGCTGCTATTGCTAGTCACATGGATGTAGATAAGCTTGCTTTTACTGGTTCAACTGATACTGGAAAAATTGTCCTAGAACTGGCGGCTAAAAGCAATCTTAAGCCTGTAACTTTGGAGCTTGGTGGGAAATCTCCCTTTATTGTATGTGAAGATGCTGATGTAGATCAGGCTGTTGAGCTAGCACACTTTGCATTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCTCGAACATTTGTTCATGAACGTGTATATGATGAGTTTGTTGAGAAGGCAAAGGCTCGTGCTTTGAAACGTGTTGTTGGTGATCCATTCAAGCAGGGAATAGAGCAAGGTCCTCAGGTTGATTCAGAGCAATTTGAGAAAATACTGAGGTATATCAGATCTGGTGTTCAAAATGGGGCTACCCTTGAAACTGGAGGAGATAGGCTTGGCAACAAGGGCTTCTATATTCAGCCTACTGTCTTCTCAAATGTTAAGGATGACATGCTTATTGCAAAGGAAGAGATCTTTGGTCCAGTGCAATCCATATTAAAATTCAAGGACCTTGATGAGGTAATTCAAAGAGCAAATAAGACACATTATGGCCTTGCAGCAGGGGTCTTCACAACGAACATAGACACTGCCAATACTTTGACTAGAGCATTGAAAGCTGGAACAGTGTGGATAAATTGCTTTGATACATTTGATGCTGCAATTCCATTTGGCGGGTACAAGATGAGTGGGCAGGGTAGAGAAAAAGGAGAGTACAGTCTTAAGAACTACTTGCAAGTGAAGGCTGTTGTTACTTCCTTGAAGAACCCAGCATGGCTTTGA 1617 0.4348 MASSLRISRLISRSFSSASSTPLFSRGGNGYLGTRLCKYSTATAVEEPIKPAVQVDHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDQGPWPKMTAYERQRIMLRAADLLEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLVMFGWKVGPALACGNTIVLKTAEQTPLSAIYAAKLFHEAGLPAGVLNIVSGFGPTAGAAIASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKQGIEQGPQVDSEQFEKILRYIRSGVQNGATLETGGDRLGNKGFYIQPTVFSNVKDDMLIAKEEIFGPVQSILKFKDLDEVIQRANKTHYGLAAGVFTTNIDTANTLTRALKAGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTSLKNPAWL* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02722 538 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 62 320 - -
Rops2g02722 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Rops2g02722 538 FunFam Mitochondrial aldehyde dehydrogenase 2 310 499 - -
Rops2g02722 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 44 528 - -
Rops2g02722 538 SUPERFAMILY ALDH-like 54 532 IPR016161 GO:0016491
Rops2g02722 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Rops2g02722 538 CDD ALDH_F2BC 55 530 - -
Rops2g02722 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
Rops2g02722 538 FunFam Aldehyde dehydrogenase, putative 500 526 - -
Rops2g02722 538 Pfam Aldehyde dehydrogenase family 66 528 IPR015590 GO:0016491
Rops2g02722 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 526 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02722 Rops-Chr2 46054012 46057742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02722 6 538 Aldehyde Dehydrogenase Gene Family AT3G48000 78.090 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02722 K00128 - gmx:100777399 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g02722 2 46054012 46057742 Rops2g02722 2 46054012 46057742 ECH