Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02720 ATGAAGCTTTTAGGGAAATGTTCCTTGCTATTACTTCTGCTGTTCAGCACCCTTCATCTTGTGTGTACTCAAACTTCTGTTCATAATTGTGTCCTTGATATTCAATTTTCTTCAGCCATGAATAGCTCAAATTGTGAATTGAACAATTGGGGAGGGTTTACCAACAGTTGCTGTGGACTAGATTTAGGTGATTACCTATATGCCTTGGGGCTGAAGGCCAGCCACACTGGAACAATATTCTTGAATTCCTCAGAGCAGAAAAACTGCTTAGCATCAATGGAAGCTTTTGAGAAACATTTTACGGGCTGTGGCATAGAGAAGCTAACAAGTGGAGCTGGTGATTGCTCCGAGTACACTGTTAAAGATGTTATCAACAAACTTGGAGACAACTTGAAGAGAATGAATGAAGATTGCATGCCTTCAAGCATAAATGGCAGGCCAAATGAAACTTGCACTGCATGTTTGAAAGCATGGGATGATATCAGTGCAGACAATTCATGGGGTTCAAAGTCAGCAAATATCAGCGCTTATATTTGTAGGTTTGCTGTGCTAATCTCACTAACAAGCTCAAGAATTCATGATAGGGAATCAATTCAGGGTGTTTATAAATGCCTTGGGGGACACAGCCTTTCTGCAGATGAGCAAGAAGTCAAGAGTGGGGGCAATGCTAATATCAACCCAGGTCTCTGGATTCTAGCCTTTGGCTTAACAGGAGTTACAGTGGTAGTGCTTCTTGCCGCACTTGCATTATTTGTCAGAAGAATTAGAAGTGCTCCAACCGTACAAGATGTGTCTGAGGATTCAACATCATTTAAGATAACTTTGAAGGATGTTTACGTAGCAACTAACAATCTCAGCGCTTCAAATTTCATTGGCCAAGGCATAGCAGGAAAAGTGTACAAAGGTATACTCTCCAACGGTCGTTATGTTGCAGTAAAGCATATCATCAAAGAAGGTTACATGGAGACATTTGTTAGAGAAGTGAGAAGCCTTACCCATGTTAGACATCCAAACCTAGTTGCTTTGCTCGAACACTGCGAAAATGAAGCCGAATGCTTCCTGGTGTATGAACTATGCCACAATGGAAACCTCTCAGAGTGGCTATTTGGCAATGATAAAGTTCTTTCCTGGATTCAAAGACTAGAGGTTGCCATTGATAGTGCAAGAGGTCTGGAGTTTCTCCACACCTACCCAGGTGGCTGCATTGTTCACCGTGATATAAAGCCATCAAATATTCTAATTGATGCCAACTTCCAAGCAAAGCTTTCAGACTTTGGGTTATCCAGGATTATGGACCCGGGTCAATCCTATGTGAGCTCTGAAGTGAGGGGAACATTTGGTTATATTGATCCTGAATATAGGAGAAACCACCATGTAAATGCCTCAGGAGATATCTACAGCTTTGGAATAGTGTTACTGCAACTTCTATCAGGACAAAGGGTCCTAAGCATGGATTTCCAAAGACCAATGTCTATAAGCAAAATGGCCAGAGATTTTGCTAGAAGCGGTGGTATTTCAGAATTTGCTGATCCTAAGCTCAAAGGGGAGTACTCTGTAGAAGCATTTGACATCATATTAAAGCTAGCTCTGTCTTGTATAGGGCTCAAGCAGAAAAGGCCCTCTATAGAGCAAGTGTTGTATAGCCTAGTAAAGGCACTCGATATCTCGTTATAG 1674 0.4164 MKLLGKCSLLLLLLFSTLHLVCTQTSVHNCVLDIQFSSAMNSSNCELNNWGGFTNSCCGLDLGDYLYALGLKASHTGTIFLNSSEQKNCLASMEAFEKHFTGCGIEKLTSGAGDCSEYTVKDVINKLGDNLKRMNEDCMPSSINGRPNETCTACLKAWDDISADNSWGSKSANISAYICRFAVLISLTSSRIHDRESIQGVYKCLGGHSLSADEQEVKSGGNANINPGLWILAFGLTGVTVVVLLAALALFVRRIRSAPTVQDVSEDSTSFKITLKDVYVATNNLSASNFIGQGIAGKVYKGILSNGRYVAVKHIIKEGYMETFVREVRSLTHVRHPNLVALLEHCENEAECFLVYELCHNGNLSEWLFGNDKVLSWIQRLEVAIDSARGLEFLHTYPGGCIVHRDIKPSNILIDANFQAKLSDFGLSRIMDPGQSYVSSEVRGTFGYIDPEYRRNHHVNASGDIYSFGIVLLQLLSGQRVLSMDFQRPMSISKMARDFARSGGISEFADPKLKGEYSVEAFDIILKLALSCIGLKQKRPSIEQVLYSLVKALDISL* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02720 557 FunFam probable receptor-like protein kinase At5g59700 359 557 - -
Rops2g02720 557 ProSiteProfiles Protein kinase domain profile. 285 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02720 557 Pfam SPARK 27 163 IPR043891 -
Rops2g02720 557 Gene3D Transferase(Phosphotransferase) domain 1 359 555 - -
Rops2g02720 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Rops2g02720 557 Pfam Protein kinase domain 289 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02720 557 SMART serkin_6 285 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g02720 557 FunFam Serine/threonine kinase protein 250 358 - -
Rops2g02720 557 SUPERFAMILY Protein kinase-like (PK-like) 265 549 IPR011009 -
Rops2g02720 557 Gene3D Phosphorylase Kinase; domain 1 248 358 - -
Rops2g02720 557 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 142 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02720 Rops-Chr2 46007069 46010095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02720 272 555 Receptor kinase-like Gene Family AT1G49100 40.550 3.48e-58 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Rops2g02720 Pkinase 8.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02720 - - gsj:114395768 839.336