Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02711 ATGTCTCTCTCTGCTTCACTCTCCTCCACAATTTCCCACCTCACCATCCTTCCTTCTCTCCCTTCTACCTCCTCTCCACTTTCTGTCAGATTTTCCCTCACTTTCCGGGAAAACAGAAACTCAACCACACCTCTCACAACCCTCTTCCCTCACAAGCAACCGTTTTCAGCAAGACCTGCAAGAGTATTGGTCAAGTCTCAGGCTACTTCACCTGCTACTTCTGAGGCTGTGAAAGTGACACCTGTGCCTTCTGACATGAAGGCCTGGGTGTATGGGGAATATGGGGGTGTGGATGTTTTGAAGTTTGACTCCAATGTTGCTGTGCCTGATGTGAAGGAGGATCAGGTCCTTATCAAAGTTTTTGCTGCAGCTCTTAACCCTGTTGATGCCAAGAGAAGGCAGGGAAAGTTCAAGGCCACTGATTCTCCTCTTCCGACTGTTCCGGGCTATGATGTTGCTGGTGTGGTGGTGAAGGTTGGTAGTCAAGTAAAGGACTTCAAAGTGGGTGATGAAGTATATGGGGATGTAAACGAGAAAGCACTAGAAGGGCCTAAGCAGTTTGGGTCTCTGGCTGAGTACACAGCTGTAGAGGAGAAATTGTTGGCACCAAAACCTAAGAATTTGGACTTTGCTCAAGCTGCTTCTCTTCCTCTAGCAATTGAGACTGCTTATGAGGGTTTGGAGAGGACTGGATTTTCTCCTGGTAAATCTATTCTTGTTCTAAATGGTTCTGGTGGAGTTGGAAGTCTAGTGATTCAGCTAGCTAAGCAAGTTTTTGAAGCTTCAAGAGTAGCTGCCACTTCAAGCACTAGAAATTTGGAGCTGTTGAAAAGCCTGGGTGCTGATTTGGCCATTGACTACACAAAGGAGAACTTTGAAGACTTACCAGAAAAATTTGATGTAGTTTATGATGCCATAGGGCAATGTGACAGGGCAGTGAAGGCTATCAAAGAAGGTGGCAATGTGGTAGCACTCACAGGTGCTGTTACACCACCTGGCTTCAGATTTGTAGTAACTTCCAATGGAGCTGTTCTGAGGAAACTGAACCCCTTTTTAGAGAGTGGAAAGGTGAAGCCAATTGTAGACCCCAAAGGTCCATTCCCCTTTGCCCAGGTTGCTGAAGCCTTCTCTTACCTTGAAACAAACCGAGCTACCGGAAAGGTTGTAATTCATCCCATCCCATGA 1185 0.4641 MSLSASLSSTISHLTILPSLPSTSSPLSVRFSLTFRENRNSTTPLTTLFPHKQPFSARPARVLVKSQATSPATSEAVKVTPVPSDMKAWVYGEYGGVDVLKFDSNVAVPDVKEDQVLIKVFAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSQVKDFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLAPKPKNLDFAQAASLPLAIETAYEGLERTGFSPGKSILVLNGSGGVGSLVIQLAKQVFEASRVAATSSTRNLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAIKEGGNVVALTGAVTPPGFRFVVTSNGAVLRKLNPFLESGKVKPIVDPKGPFPFAQVAEAFSYLETNRATGKVVIHPIP* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02711 394 Pfam Zinc-binding dehydrogenase 279 390 - -
Rops2g02711 394 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 77 394 IPR044626 GO:0016628
Rops2g02711 394 SMART PKS_ER_names_mod 95 390 IPR020843 GO:0016491
Rops2g02711 394 Pfam Alcohol dehydrogenase GroES-like domain 114 176 IPR013154 -
Rops2g02711 394 Gene3D - 93 390 - -
Rops2g02711 394 Gene3D - 227 341 - -
Rops2g02711 394 SUPERFAMILY GroES-like 84 240 IPR011032 -
Rops2g02711 394 CDD MDR_like_2 86 390 - -
Rops2g02711 394 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 235 256 IPR002364 GO:0008270|GO:0016491
Rops2g02711 394 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 208 330 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02711 Rops-Chr2 45602442 45605565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02711 110 282 Monolignol Biosynthesis Gene Families AT4G39330 25.628 1.61e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g02711 2 45602442 45605565 Rops2g02711 2 45602442 45605565 ECH