Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g02694 ATGGCTTTGAACATGATGCTTCAATCATGGCTTCTTTTGAGCCTTGTTTTTGTTTTACATATTTTTTCAATACCAACCTGTGGCCTGACCAGTTCTCCCCAGAACATTGAAACTTTCTATCCAAATGAAACTGCAGCACCAGCACCAGCCCCAGCAACACAACCACCTGAACCACAACCAAAGCCAAAACCATCACCACCAACACAAGGGCAGGCCCCAGGACCAGTTGCAGCATCCAAAAGTACTTCATCAAATGGTAAGATAGCAAAGGCTGTAGCTGCAACTGTTGCAAGCACTGCAGTTCTTTGTGGTTTAATCTTCATTTTATATCAAAGGTGGTCAAGGGCAAGAAGGAAAAAGGAGATAATTGACACTGCTTCTGGTGGAGATAGGCGTGTTGTACCTCAGGGAAATGTGTTTGAGAGAATTGATGGAAATGTCAAGGGACTCATTGTTGATGAGGATGGTTTGGATGTGATCTATTGGAGAAAACTTGAAGGGAAAAACTCCAACAGAGATCTTCATAAGGAGGTCTTGCCTAGTCCCAGAAACAAAGAAGTAGAAGATGATGATGATGAAGGAAATCAAGTGAAAAAGTCCAAGTCTATCCAAGAAATTCCTCTGCTTAGAGGGCAATCTTCAACTTCCCACATAAATATATCTCCAGAAGAGGATGAGCCATATAGAATTACAAGAATCCCCCCTCCTAGTTTTCCTGCATCAGATGGGGTTGCTATCAAGGGTGTTCAGAAACCTGACCCTCCAATTCAACCATCCAATCTATCCCCTCCTCCCCCTTCATCATCAACACCATCACCATCCTCCATTTCTTTTTCAGCAATTGCGAAAACGAATAGCCATGGATCATCACCTGCTCCTCCACCAATGCCAGAGAAAAAGATTCCAGCAGCACCACCTGCCCCTCCCCCAATCCCAGCTAGAAAGAGTCCAGCACCACCTCCTCTTCCTCCACCAAAGACAGGTAGTTTGAATTCATCATCAAAATCACCATCTGGCCCCATTGAAATGCCAGTTATCTCCCCCAGCAAGCAAAGAAACTCTTCAGGGGAAGGCGTGCCAGAAACCAGCAATGATCAAGTGAAGCTGAAGCCTTTGCATTGGGACAAGGTGAATACTAATGCTGATCATTCCATGGTTTGGGACAAAGTTGATCGTGGCTCTTTCAGAGTTGATCAAGATCTTATGGAAGCTCTCTTCGGTTATGTCGCCATCAACCGAAGATCCCCCAAAGGAAACAATCATTCAACAAGTACAAGCAATGATGCCTCAGCTCCAACAACAAAAATTTTCCTCCTTGACCCCAGAAAATCACAGAACATTGCTATTGTTTTGAAATCTCTAGCAGTCTCACAAGGTGAAATTCTTGATGCACTCATTGATGGTAAAGGCCTCAATGTAGATACCCTTGAAAAGCTTACTAGAGTTTCCCCAACAGAAGAAGAGAAATCTCTTATCCTTGAATACAATGGAAACCCAGCAAGACTTGCTGCAGCTGAATCATTCCTGTATCACATCCTTAAAGCTGTTCCCTCAGCATTTAAACGCTTGAATGCCATGCTATTCAGATTGAACTATGACTCCGAGATTCTAGAAATCAAGGAATCTCTGCAGACCATTGAAATGGGGTGTAAGGAGCTTAAAAGCAAGGGTGTCTTTGTGAAGCTTCTTGAAGCAGTGCTTAAAGCAGGAAATCGCATGAATGCAGGAACTGCTAGAGGTAATGCTCAAGCTTTCAACTTGGAATCTCTAAGGAAACTCTCTGATGTCAAGAGCTCCAATGGAAAAACCACATTACTTCACTTTGTGGTTGAAGAAGTAGTCCGTTCTGAAGGAAAACGTGTTGTTCTTAACCGCAATGGCAGCCTGAGCAGCAGTAGTAGTAGGAGCATTAACATGAGTGGAAACTCTGAGAACAATGTCACTTCAAATGAACAGAGAGAAAGGGAATATACAATGCTAGGATTACCAGTTGTAGGAGGGATCAGTTCTGAGTTATCCAACGTTAAGAAAGCAGCACATATAGATTATAACAGTTTAGTTGGTTCAATCTCAGCCCTCTCAACTCGGCTAGTTGAAATTCAGGAACTTGTTTCCCGGTTTGGAAATGGTGAAAGAGGACATTTTGTAAAAGAAATGGAAAATTTTCTCAGAAATGCTGAGGAAGAATTGAAATTAGTGAAGGACAAACAAACAAGCGTGTTGCAGCTTATCAACAAAACAACACAATGTTATCAAGTAGGAGTTTCGAAAGGCACTGCAGAACAAAATCTTCGACTATTTGTTATAGTCAAGGATTTTCTGGTAATGGTTGATCAAGCTTGCATTGAGATTACACGTAACATGCAGAAAAAGAAGACCCCTAACACAATTTCTGGCTAA 2400 0.4233 MALNMMLQSWLLLSLVFVLHIFSIPTCGLTSSPQNIETFYPNETAAPAPAPATQPPEPQPKPKPSPPTQGQAPGPVAASKSTSSNGKIAKAVAATVASTAVLCGLIFILYQRWSRARRKKEIIDTASGGDRRVVPQGNVFERIDGNVKGLIVDEDGLDVIYWRKLEGKNSNRDLHKEVLPSPRNKEVEDDDDEGNQVKKSKSIQEIPLLRGQSSTSHINISPEEDEPYRITRIPPPSFPASDGVAIKGVQKPDPPIQPSNLSPPPPSSSTPSPSSISFSAIAKTNSHGSSPAPPPMPEKKIPAAPPAPPPIPARKSPAPPPLPPPKTGSLNSSSKSPSGPIEMPVISPSKQRNSSGEGVPETSNDQVKLKPLHWDKVNTNADHSMVWDKVDRGSFRVDQDLMEALFGYVAINRRSPKGNNHSTSTSNDASAPTTKIFLLDPRKSQNIAIVLKSLAVSQGEILDALIDGKGLNVDTLEKLTRVSPTEEEKSLILEYNGNPARLAAAESFLYHILKAVPSAFKRLNAMLFRLNYDSEILEIKESLQTIEMGCKELKSKGVFVKLLEAVLKAGNRMNAGTARGNAQAFNLESLRKLSDVKSSNGKTTLLHFVVEEVVRSEGKRVVLNRNGSLSSSSSRSINMSGNSENNVTSNEQREREYTMLGLPVVGGISSELSNVKKAAHIDYNSLVGSISALSTRLVEIQELVSRFGNGERGHFVKEMENFLRNAEEELKLVKDKQTSVLQLINKTTQCYQVGVSKGTAEQNLRLFVIVKDFLVMVDQACIEITRNMQKKKTPNTISG* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g02694 799 MobiDBLite consensus disorder prediction 48 71 - -
Rops2g02694 799 MobiDBLite consensus disorder prediction 256 271 - -
Rops2g02694 799 MobiDBLite consensus disorder prediction 173 371 - -
Rops2g02694 799 MobiDBLite consensus disorder prediction 41 82 - -
Rops2g02694 799 Gene3D Formin, FH2 domain 377 796 IPR042201 -
Rops2g02694 799 Pfam Formin Homology 2 Domain 363 777 IPR015425 -
Rops2g02694 799 Coils Coil 716 736 - -
Rops2g02694 799 MobiDBLite consensus disorder prediction 173 199 - -
Rops2g02694 799 MobiDBLite consensus disorder prediction 290 327 - -
Rops2g02694 799 MobiDBLite consensus disorder prediction 200 221 - -
Rops2g02694 799 MobiDBLite consensus disorder prediction 347 362 - -
Rops2g02694 799 ProSiteProfiles Formin homology-2 (FH2) domain profile. 359 799 IPR015425 -
Rops2g02694 799 MobiDBLite consensus disorder prediction 625 651 - -
Rops2g02694 799 SUPERFAMILY Formin homology 2 domain (FH2 domain) 305 792 - -
Rops2g02694 799 MobiDBLite consensus disorder prediction 272 289 - -
Rops2g02694 799 PANTHER FORMIN-RELATED 32 788 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Rops2g02694 799 SMART it6_source 359 792 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g02694 Rops-Chr2 45216831 45219896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g02694 366 784 FH2 protein (formin) Gene Family AT1G59910 54.762 7.41e-146 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g02694 - - gmx:100783219 928.702